Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0993 ATGCGACGACGGGCGGCCGAGTATCGGCGCCCGGTTCGACGGAGGTTTTCTTATTGGATCTGGCTGCTCCTTGCTTTGTTCTGTATTGCCGGTCTGGTTTTGTTTGTTGTACAACATAATCACGACGAAGATCAGAGAACACACGACTACCTTTTTCAGGAGAGATATGCAAGAGTTGAACATGTTGCTAAGAAGAATTTGAATTTTACAGAAGAAATATTAAGTGCAACCTCATTTTCACGGCAGTTAGCCGAGCAAATGACTCTAGCTAAAGCATATGTGATTATTGCTAAAGAGCACAATAGCCTTCACCTAGCCTGGGAGCTCAGCTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAGAGCTGCCATGACAGGAAAGCCTGTGAAACTGGAGGAAGCTGGACCAATTATTCAAAGCCTATCTTCTCTAATCTTTAAGGCACAGGACCTTCATTATGACATTGCAACCACAATCATGACAATGAAATCACATATTCAAGCTCTTGAAGAGCGTGCAAATGCAGCAACAGTTCAAAGCACTGTGTTTGGTCAACTAGCGGCTGAAGCACTACCCAAGAGTCTCCATTGcctaaatatcaaacttatGACTGACTGGTTAAAGACACCATCCCTGCAAGAACTCTCAGATGAGAAGAGAAACTCCCCACGGCTCATGGACAACAATCTGTATCATTTTTGCATATTTTCAGATAATGTGTTGGCCACATCTGTAGTTGTTAACTCCACTGTCTCTAATGCTGATCATCCAAAACAATTGGTCTTTCACATTGTTACTAATGGTGTCAACTATGGAGCAATGCAAGCATGGTTCCTCAGTAATGAATTTAAAGGGGCCACTATAGAAGTGCAGAACATTGAAGAGTTTCATTGGTTGAATGCATCTTATTCTCCAGTTGTCAAGCAGCTCCTTAATGCAGATTCACAGGCCTTCTATTTTGGGGGTTATCGTGATGTAAATGTTGAACTTGAACCGAAAATGAGGAACCCTAAGTATTTGTATTTACTGAATCATCTGCGGTTTTATATCCCTGAGATTTATCCACAGCTGGAGAAGGTTGTTTTCCTGGATGATGATGTTGTTGTCCAGAAGGATCTGACCCTGCTTTTCTCCATTGATTTGCATGGAAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGTTACTACAAGTATCTCAACTTCTCAAATTCAATTATTAGCTCAAAATTTGATCCGCAGGCATGTGGGTGGGCATTTGGTATGAACATTTTCGACTTGGTTGCATGGAGGAAAGCAAACGTGACTGGAAGATATCACTATTGGCAGGAGCAGAATGCTGATGGCACACTTTGGAAGGTGGGTACTCTTCCTCCTGGTCTTCTAAGTTTTTATGGTCTCACAGAGCCACTTGATAGGAGATGGCATGTTTTGGGATTGGGCTTTGACCTAAATATTGACAACCGCCTGATTGAAAGCGCGGCAGTTATTCACTTTAACGGGAACATGAAGCCATGGCTGAAGGTGGCTATTGAGAGGTATAAGCCACTTTGGGACAGGTACATAAAACAGAGTCACCCTCATCTTCAAGATTGTGCCACAAGTTGA 1620 0.4216 MRRRAAEYRRPVRRRFSYWIWLLLALFCIAGLVLFVVQHNHDEDQRTHDYLFQERYARVEHVAKKNLNFTEEILSATSFSRQLAEQMTLAKAYVIIAKEHNSLHLAWELSSKIRSCQLLLSRAAMTGKPVKLEEAGPIIQSLSSLIFKAQDLHYDIATTIMTMKSHIQALEERANAATVQSTVFGQLAAEALPKSLHCLNIKLMTDWLKTPSLQELSDEKRNSPRLMDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWFLSNEFKGATIEVQNIEEFHWLNASYSPVVKQLLNADSQAFYFGGYRDVNVELEPKMRNPKYLYLLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTLLFSIDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWAFGMNIFDLVAWRKANVTGRYHYWQEQNADGTLWKVGTLPPGLLSFYGLTEPLDRRWHVLGLGFDLNIDNRLIESAAVIHFNGNMKPWLKVAIERYKPLWDRYIKQSHPHLQDCATS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0993 539 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 539 IPR029993 GO:0047262
Sto12g0993 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 536 IPR029044 -
Sto12g0993 539 Pfam Glycosyl transferase family 8 236 512 IPR002495 GO:0016757
Sto12g0993 539 PANTHER HEXOSYLTRANSFERASE 3 539 - -
Sto12g0993 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 536 IPR029044 -
Sto12g0993 539 CDD GT8_like_1 232 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0993 Sto-Chr12 6189295 6192383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0993 1 536 Glycosyltransferase AT2G20810 55.185 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0993 K13648 - gmx:100805886 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0993 12 6189295 6192383 Sto12g0993 12 6189295 6192383 ECH