Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0979 TTGGGAGATTCTCTGAAAAGTACAGAAGTAGACCTTAAAGATATAAGTCCTGATTGTTCACTGGAAGATTCTTCAGTGAAGACTGATGCTACTATAAAAGACTCATATAAAGAATCTCCAGCTGTGACTGATTATTCAAGTTCCCAAAGAAGTGAAAAAGTAAGCTTGACAAAACAGAAAGGAAATGATGTCGTTGAACTTATAAATATAAGTCCTGATTTTTTACAGGAAGGTTCTTCAATGGAGATTGATGCTACAAAAAATGACCTGTCGAGTTCCCAAAAAAGTGCAGAAGTAAACTTGAAAATGTATAAGAGGAGGAAAACTTGGAGCACAAAACATAATGCTATTGTAAGCAACATTAATGGTATTGTTGTTCCAAAAGATACCTTTTCAATTGAAACTTCTTTACctgctttatatatatttccattACATCTAGTAACAAGAAATTCACATGCAGGAAGCAACTTCTGTCCTGAAGAAAATGAAGGAAAGGAGCAGAATATGCTTGAAAAGGCTGCAGAGTCTAGCAATGCAGAGCAGGAGCTTGAGGAAGTAAGCAGCAGACCAAGCTCAATTGTAGCACGTGTTGAGCATTTTGTAGAAGAGTCTAtgccagaagttctaaatttgaACACAGTACAAGGTACAATTGATAACAGTTCCAACCCTGAGGATAATAGTGGTTATGTGAAAAATGCAAATCCAAAGAGGAAACTTGATGATTATGGGATGAGTGGATACTCCTGTTCTGTAAATTATAAAAAGGAACCCATTATGGAGGTTGACAACAAAGATGATTCAAATAAAATTTCTGATGAACCTTTGACATTTGGCTTGGTGGAGAAAGAAACAAAAGCTTTAAGGGACCAAGGTACCTTAAATGGTGGTAGTGCATCAGAGGAAATGATGCTGATGGAAAAGCACAGTTATGAGCAAAGGTCTGTGACTGATGTGTCTGTTACCGACATTCCTAAGGTGCAAATTGAAGAGGATAATGGTAGAAAGCAGGACATTAATCAGATTACAAGACATGATATGTCTTCTGCAGGTGACACCGCTGATTTAAGCTTAGTCTGCAAGAAAGATGATCACTCAAAGATAACACACGTTCCACTTGGTAAAACAATTACTAGCCACTCAAAGAAGAAGCTTCTTGTTCTTGATGTCAATGGATTGCTTGCTGACTTTGTTGAGCATGTTCCTTGGGGATATGAACCAGACACATGGATTTCTTCGAAAGCAGTTTTCAAGAGGCCCTTCTGTGATGATTTTCTAGAGTTCTGCTTTGACAGATTTTATGTGGGGGTTTGGTCATCAAGACACAAGTATAATGTTGATGCGGCAATTAGGTTTCTTATGGGGAAGTCTGCATCCAAACTGCTCTTTTGTTGGAACCAGTACCAATGTACTAAGACAGACTTCGAAACCGTTGAGAATAGAGACAAACCACTTGTATTTAAGGAACTTAGAAAGTTGTGGGAAAAGCTTGAACCTGGTCTTCCATGGGAGAAGGGAGAGTTTAATGAGTCAAATACTTTACTGTTGGATGACTCCCCTCATAAGGCACTACTAAATCCAGAGCACACCGCAATATTTCCTTATTCTTACAATTTCCGCGATAGAAGAGACTCATCATTAGGACCTGGAGGTGATCTTCGGGCTTATCTTGAAGGATTAGCAATGGCTGAAAAGGTTCAAGAGTATGTGGCTTCAAATCCATTTGGCCAACGGGCTATAACTGAAAGAAATCCATCTTGGCGTTACTACAAAAAAGTTATAGATAGTGTAAATGCCCCCAATGATTTCAGAACCTTCTCTTCTTCTCGCTGGGAGCGAACTGCTTACCGGGGTTCTCGGTTCTAG 1869 0.3826 LGDSLKSTEVDLKDISPDCSLEDSSVKTDATIKDSYKESPAVTDYSSSQRSEKVSLTKQKGNDVVELINISPDFLQEGSSMEIDATKNDLSSSQKSAEVNLKMYKRRKTWSTKHNAIVSNINGIVVPKDTFSIETSLPALYIFPLHLVTRNSHAGSNFCPEENEGKEQNMLEKAAESSNAEQELEEVSSRPSSIVARVEHFVEESMPEVLNLNTVQGTIDNSSNPEDNSGYVKNANPKRKLDDYGMSGYSCSVNYKKEPIMEVDNKDDSNKISDEPLTFGLVEKETKALRDQGTLNGGSASEEMMLMEKHSYEQRSVTDVSVTDIPKVQIEEDNGRKQDINQITRHDMSSAGDTADLSLVCKKDDHSKITHVPLGKTITSHSKKKLLVLDVNGLLADFVEHVPWGYEPDTWISSKAVFKRPFCDDFLEFCFDRFYVGVWSSRHKYNVDAAIRFLMGKSASKLLFCWNQYQCTKTDFETVENRDKPLVFKELRKLWEKLEPGLPWEKGEFNESNTLLLDDSPHKALLNPEHTAIFPYSYNFRDRRDSSLGPGGDLRAYLEGLAMAEKVQEYVASNPFGQRAITERNPSWRYYKKVIDSVNAPNDFRTFSSSRWERTAYRGSRF 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0979 622 MobiDBLite consensus disorder prediction 162 190 - -
Sto12g0979 622 Coils Coil 163 190 - -
Sto12g0979 622 MobiDBLite consensus disorder prediction 172 189 - -
Sto12g0979 622 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 120 601 - -
Sto12g0979 622 SMART forpap2 383 543 IPR004274 -
Sto12g0979 622 Pfam NLI interacting factor-like phosphatase 385 567 IPR004274 -
Sto12g0979 622 Gene3D - 342 576 IPR023214 -
Sto12g0979 622 ProSiteProfiles FCP1 homology domain profile. 380 561 IPR004274 -
Sto12g0979 622 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 120 601 - -
Sto12g0979 622 SUPERFAMILY HAD-like 381 571 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0979 Sto-Chr12 6082356 6085684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0979 - - aprc:113864558 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0979 12 6082356 6085684 Sto12g0979 12 6082356 6085684 ECH