Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0973 ATGCTTTCCTTTACCTCAAAAACTCTAATTTTGATTATCGATTTGGTGACGAGGGCTTTTCCTTTTGCTCTATCTGTTTCTTCGATCAATACTCATGCACGAAAGAAACCTGGAGTAGAAAGTTTGACAGGTTTTGCTCCTTTTATATTGCTGTTTTTGGTTGTTCATTGCACTGCCAGACCACTCTATCCACTTCCTAGTAGAAATACTCATGGAAGTAGACAGCCTTTGCAAACTTTTCGCCCATTTAACATCGCGCATCGAGGTTCAAATGGAGAGCTTCCGGAAGAAACTGCCCCTGCTTACATGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAAGCTGACATCCTCTCCTCCAAAGACGGTGTTCTTATATGCTTCCATGATGTTTTCCTTGATAATACTACTGACATTGCAAAACACAAAGAGTTTGCAGATCGCAAAAGGACCTATGAAGTTCAAGGGGTCAACACCACTGGATTTTTTTCTGTTGATTTTACTCTAGAGGAATTGAAGTCATTGAGGGCGAATCAGAGGTATAGCTTCAGAGATCAACAATTCAACGGAAAATTTGAAATCATAACTTTTGAAGAGTATATTTCCATTGCACTGGATGCACCCAGAGTTGTTGGAATATATCCTGAGATAAAGAATCCAGTATTTATTAATCAGCATGTAAAATGGGCAAATGGCAAAATATTTGAGGACAAGTTTGTAGAGACACTAGAGAAATATGGATACAAGGGTTCATACATGTCAAAACAATGGTTGAAACAACCTGCATTTATTCAGTCATTTGCTCCATCTTCACTTGTATATATATCAAACCAGACAGACCTGCCCAAGCTTTTCTTAATCAATGATTTTACTATTCTCACAGAAGATACTAATCAGACATATTGGGATATTACATCTGATAGCTACCTTGACTATATAAAGCAATATGTTTTGGGAATTGGACCTTCGAAGGACACAATTGTCCCTATTGTAAATAATTATTTGCAAACTCCTACTGATCTTGTTGCCAGGGCACATGCACATAACCTGCAGGTGCACCCATATACTTACAGAAGTGACAACAACTCTTTGCGCTTCAACTTTAGTCAAGACCCTTATGAGGAATATGATTATTGGATCAACAAGATAGGAGTTGATGGTCTTTTTACAGACTTCCCAGGTACCCTTCATAAGTTTCAGGAATGGACCTCCTCCAAATCTTCACATGACAGTGACAACAAGACTGCATCTGAGCTATTACATATAATTGCAAACTTAGTCTCTTCCTATAAAAGGACATGA 1302 0.3833 MLSFTSKTLILIIDLVTRAFPFALSVSSINTHARKKPGVESLTGFAPFILLFLVVHCTARPLYPLPSRNTHGSRQPLQTFRPFNIAHRGSNGELPEETAPAYMRAIEEGADFIEADILSSKDGVLICFHDVFLDNTTDIAKHKEFADRKRTYEVQGVNTTGFFSVDFTLEELKSLRANQRYSFRDQQFNGKFEIITFEEYISIALDAPRVVGIYPEIKNPVFINQHVKWANGKIFEDKFVETLEKYGYKGSYMSKQWLKQPAFIQSFAPSSLVYISNQTDLPKLFLINDFTILTEDTNQTYWDITSDSYLDYIKQYVLGIGPSKDTIVPIVNNYLQTPTDLVARAHAHNLQVHPYTYRSDNNSLRFNFSQDPYEEYDYWINKIGVDGLFTDFPGTLHKFQEWTSSKSSHDSDNKTASELLHIIANLVSSYKRT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0973 433 ProSiteProfiles GP-PDE domain profile. 82 400 IPR030395 GO:0006629|GO:0008081
Sto12g0973 433 CDD GDPD_ScGlpQ1_like 82 393 - -
Sto12g0973 433 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6 47 405 - -
Sto12g0973 433 Gene3D Phosphatidylinositol (PI) phosphodiesterase 80 400 IPR017946 GO:0006629|GO:0008081
Sto12g0973 433 Pfam Glycerophosphoryl diester phosphodiesterase family 87 395 IPR030395 GO:0006629|GO:0008081
Sto12g0973 433 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 47 405 - -
Sto12g0973 433 SUPERFAMILY PLC-like phosphodiesterases 82 399 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0973 Sto-Chr12 6030742 6033843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0973 54 404 Acyl Lipid Metabolism Gene Families AT5G08030 78.348 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0973 K01126 - gmx:100778145 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0973 12 6030742 6033843 Sto12g0973 12 6030742 6033843 ECH