Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0968 TTGGCCTCTCCAATGGCCGAGAGCCGAAGACCCACAAGCGTTCTTGACTCTCTGGGGGAAGAAATTGTTAGAATCGTAGCACCTGTATCACTCTGCATGTTTTTGGTAGTAATCTTGGTCTCAATTCTTAATAGCAATTCCTCTTCGTCACCAACAATCTCCAGTATAGCCACCATAGCATATAGTGAGGCCAGCTCTGATTCTTCCTGGGATAAGTTCTTAGGTGCCCTTTTGAACTCCTTGGCATTCGTAGTTGTTGTTACTGTTGTGACATTTGTTTTGGTTCTTCTCTTCTATTTAAGATGCACTAAGTTCTTAAAACTATATATGTGTTTCTCTTCTTttattgttttaggattcttaGGTAGTGAAATTGCAATATTTTTAATTGAACATTTTAGGGTCCCAATTGATTGCATAACATTTTCTCTGGTTGCCTTTAATTTTGCTGTTGTTGGTGTATTGGCCATCTTTATGTCAAAAATGGCAATTGTTGTTACACAAGGGTACTTGTTTCTTATTGGAATATTGGTCGCTTATTGGTTTACTATGTTACCTGAATGGACCACTTGGGTGCTACTGGTTGCCATGGCATTATATGATCTTGCTGCAGTTTTACTACCTATTGGACCATTAAGGCTTTTGGTGGAGCTTGCAATATCAAGAGATGAAGAAATTCCAGCACTGGTTTACGAGGCTAGGCCAGTAAACTATGATAATATAGAACCAAGGGGTGGTGTGACACATAGGCGGGTGTGGAGAGATAGGAGGATCGAGAATTCAAATCTCCAAACCAATTCCATCCCGAATGCCGAATCAAACTCCAATCTAAATGCAAATCCAAATTTGAATGGCAATACTCTAGATGGAACACATGATGAAGCAAATTTGGTTGTGGAGAATGATATTTCAAATTCAAGTTTGAATTCTAACACTCATGATTTAGTCCGAGCTGAAGAGGGACGGGTTCAAGAAACTGATTCAGAGCTTTCTCCCCTAATTGATCATGGAAGGAATGTCCAGTTCAATAGAGCAGAAGAAGCATTGTCAAATGAAAATTTGATTCCAGAGGGAATAGGACTGGCTTCATCTGGTGCAATCAAACTAGGGCTGGGAGATTTCATCTTCTATAGCGTTTTGGTTGGCAGGGCGGCAATGTATGATTTTATGACCGTATATGCTTGTTATCTTGCTATCATTGCTGGCCTGGGAATCACTTTGATGCTTTTGGCTTTCTATCAGAAAGCTTTGCCTGCTCTTCCAGTGTCAGTAACATTGGGAGTTCTGTTTTATTTCTTGACCAGGCTCTTACTTGAAGTATTTGTTCTGCAGTGTTCCTTGAATCTCTTGATGTTCTAA 1359 0.3959 LASPMAESRRPTSVLDSLGEEIVRIVAPVSLCMFLVVILVSILNSNSSSSPTISSIATIAYSEASSDSSWDKFLGALLNSLAFVVVVTVVTFVLVLLFYLRCTKFLKLYMCFSSFIVLGFLGSEIAIFLIEHFRVPIDCITFSLVAFNFAVVGVLAIFMSKMAIVVTQGYLFLIGILVAYWFTMLPEWTTWVLLVAMALYDLAAVLLPIGPLRLLVELAISRDEEIPALVYEARPVNYDNIEPRGGVTHRRVWRDRRIENSNLQTNSIPNAESNSNLNANPNLNGNTLDGTHDEANLVVENDISNSSLNSNTHDLVRAEEGRVQETDSELSPLIDHGRNVQFNRAEEALSNENLIPEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLAFYQKALPALPVSVTLGVLFYFLTRLLLEVFVLQCSLNLLMF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0968 452 PANTHER PRESENILIN 12 452 - -
Sto12g0968 452 MobiDBLite consensus disorder prediction 263 289 - -
Sto12g0968 452 Pfam Presenilin 19 442 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto12g0968 452 Gene3D Presenilin 348 444 IPR042524 -
Sto12g0968 452 PRINTS Presenilin family signature 26 36 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto12g0968 452 PRINTS Presenilin family signature 201 218 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto12g0968 452 PRINTS Presenilin family signature 184 191 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto12g0968 452 PANTHER PRESENILIN 12 452 IPR001108 GO:0004190|GO:0016021|GO:0016485
Sto12g0968 452 SMART psh_8 74 438 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0968 Sto-Chr12 6004628 6005986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0968 5 452 Miscellaneous Gene Families AT2G29900 60.356 1.09e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0968 K04505 - mnt:21390524 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0968 12 6004628 6005986 Sto12g0968 12 6004628 6005986 ECH