Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0962 ATGCATCCGGTTGATACCATTAAAACAAGAATGCAAAGTCAAGCAATTCTTGATGGAATTAAGAACCAGAAGAGCATACTGCCCATGGTGAGGTCTGTCTGGAAGGCTGATGGATTAAGAGGTTTTTACAGGGGTGTAACACCCGGGATTACTGGGTCTCTTGCAACTGGCGCGACATATTTTGGTGTCATAGAGTCCACTAAAAAGTGGATTGAGGACTCACATCCTAGTCTTGCTGGCCACTGGGCGCATTTTATTGCTGGAGCTGTTGGAGATACACTTGGTTCTTTTGTGTATGTTCCTTGCGAAGTGATGAAGCTCCGCATGCAAGTTCAAGGCACACTTGCATCTTGGAGTTCTGTCGTTACGAAAGATGGCATGTCAATGAAGCCTAACATGCAAATGTATGGTTACTATACAGGGATGTTCCATGCTGGCTGCTCAATTTGGAAACAACAGGGCTTTAAGGGTTTATATGCAGGATATTGGTCTACACTAGCAAGAGATGTTCCGTTTGCTGGACTGATGGTCATGTTTTACGAAGCTATGAAGGACATAACAGAATATGGGAAGCAAAGATGGATATCAAGCCCAACTTTGCATGTCAATAGTTCTTTGGAGGGACTTGTATTAGGAGGCTTAGCTGGTGGTCTTAGTGCATACCTCACCACTCCTTTGGATGTTATCAAAACAAGATTACAAGTGCAGGGTTCATCTGTAAGGTATAATGGCTGGTTAGATGCAATTCGCAATATATGGGCTATGGAGGGCATGAAGGGGATGTTTAGGGGTAGTATACCTAGGATTACATGGTACATTCCAGCTTCGGCGCTAACATTCATGGCTGTGGAATTTCTCCGAGAGCATTTTAATGGAAAAGTGGCGGCCTCTGATAATTTTCAAAAAGTTGCAAGATTATCAGTGGACAAGAATGAGTCTTAG 942 0.4342 MHPVDTIKTRMQSQAILDGIKNQKSILPMVRSVWKADGLRGFYRGVTPGITGSLATGATYFGVIESTKKWIEDSHPSLAGHWAHFIAGAVGDTLGSFVYVPCEVMKLRMQVQGTLASWSSVVTKDGMSMKPNMQMYGYYTGMFHAGCSIWKQQGFKGLYAGYWSTLARDVPFAGLMVMFYEAMKDITEYGKQRWISSPTLHVNSSLEGLVLGGLAGGLSAYLTTPLDVIKTRLQVQGSSVRYNGWLDAIRNIWAMEGMKGMFRGSIPRITWYIPASALTFMAVEFLREHFNGKVAASDNFQKVARLSVDKNES 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0962 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 289 IPR018108 -
Sto12g0962 313 Gene3D Mitochondrial carrier domain 1 128 IPR023395 -
Sto12g0962 313 Gene3D Mitochondrial carrier domain 129 307 IPR023395 -
Sto12g0962 313 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 312 - -
Sto12g0962 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 186 IPR018108 -
Sto12g0962 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 70 IPR018108 -
Sto12g0962 313 SUPERFAMILY Mitochondrial carrier 1 286 IPR023395 -
Sto12g0962 313 Pfam Mitochondrial carrier protein 81 186 IPR018108 -
Sto12g0962 313 Pfam Mitochondrial carrier protein 206 293 IPR018108 -
Sto12g0962 313 Pfam Mitochondrial carrier protein 1 73 IPR018108 -
Sto12g0962 313 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0962 Sto-Chr12 5977434 5979814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0962 1 288 EF-hand Containing Proteins AT2G35800 28.125 2.58e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0962 - - gmx:100790921 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0962 12 5977434 5979814 Sto12g0962 12 5977434 5979814 ECH