Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0942 ATGGGATTCCACCTTGCCTTATTTATCATCTTGGCTTTTCTTCGTGTGACTTCAAGTCAAGAAGTTATACATGCTTCAATACTAGTTGATGGTAATCGAGCAAAAGCCGAAACGGATGAGAACTTCATTTGTGCTACTATTGATTGGTGGCCTCATGATAAATGTGACTACGACCACTGCCCTTGGGGATATTCATCTGTTGTAAACTTGGATTTGTCTCATCCTTTCCTTGCCAAGGCAATCCAAGCTCTCAAGCCTTTGAGGATAAGATTGGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTAGGAAGTTTGCAGTTACCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGGTGTTTACACATGAAAAGGTGGGATGAGCTGAATCATTTTTTCAACGAAACAGGAGCCATTGTGACATTTGGCCTGAATGCGCTCCATGGGAGGCACCATATCAGTCATACTGTTTGGGGAGGAGATTGGGACTCGAGCAATGCTTATGATTTTATTAGGTACACTGTCTCAAAGGGGTACAAAATCGATTCATGGGAATTTGGTAATGAGTTGAGTGGTAAGGGCATTGGTGCTAGTGTTGGTGCTGCACAGTATGGAAAAGACTTGATACATCTTAAACAAATTTTAGATACATTATATGAGGGATCTCGGTATAAACCTGCACTAGTAGCACCTGGAGGCTTCTATGAAAAGGAGTGGTATGATAAGCTTCTTCAAGTTTCAGGTTCAGGAATAGTCAATGTTCTGACTCATCACATATACAATTTGGGCGCAGGCAGTGACCCACATCTTGAAAGTAAAATTCTAGATCCTGTGCATTTGAGCAAGGTATCGTCAGTCTTCGGCAATCTTTCAGAAACCATTCAAAAGAATGGCCCTTGGGCTTCTGCTTGGGTTGGAGAAGCTGGTGGGGCATTTAATAGTGGCGGTCGTTATGTTTCTAACACATTCTTGAACAGCTTTTGGTACTTAGATCAACTTGGATTGGCGTCCACCTACATCACTAAAGTTTATTGTAGGCAGACTTTGATTGGAGGTAACTATGGCCTTATCAATACAACCACTTTCACTCCCAATCCTGACTATTACAGTGCACTTTTATGGCAACGGCTTATGGGAAAGAAGGTTCTTGAAGCTGCTACTGATGCTCCTTCACCTTTTTTGCGAACTTATGCCCATTGTTCGAAAGGAAGAGAGGGTGTAACGTTACTGCTGATCAATTTAAGTAATCAGACTCATTTCATTCTCAATGTCCAAAACCCTGTGACTGAGAATACTGAAGGAAATAAAAAGTTGAGAAGCGTGATAAGAAAAAACACTATGACTTATCATCTCAAGAAGACATTTTCCTGGGTTGGAACCAAAGGATCTTTTGTCACATTCAGAGAGGAATACCACTTAACTCCGAAAGACGATGACCCTCAAAGCCAAACCGTGTTGCTAAATGGTGTTCCACTAGAGTTAACAAACGAAGGAGAAATTCCAACAATGGATCCAGTACAGAAAAATGTACATTCTCCTATATATGTGGCTCCTCTCTCCATTGCATTTGTTGTGTACCCCAACTTTGATGCTTCAGCTTGTGTTACAAACCAAAAACGATAG 1644 0.4124 MGFHLALFIILAFLRVTSSQEVIHASILVDGNRAKAETDENFICATIDWWPHDKCDYDHCPWGYSSVVNLDLSHPFLAKAIQALKPLRIRLGGSLQDQVLYEVGSLQLPCHPFQKMKGGLFGFSKGCLHMKRWDELNHFFNETGAIVTFGLNALHGRHHISHTVWGGDWDSSNAYDFIRYTVSKGYKIDSWEFGNELSGKGIGASVGAAQYGKDLIHLKQILDTLYEGSRYKPALVAPGGFYEKEWYDKLLQVSGSGIVNVLTHHIYNLGAGSDPHLESKILDPVHLSKVSSVFGNLSETIQKNGPWASAWVGEAGGAFNSGGRYVSNTFLNSFWYLDQLGLASTYITKVYCRQTLIGGNYGLINTTTFTPNPDYYSALLWQRLMGKKVLEAATDAPSPFLRTYAHCSKGREGVTLLLINLSNQTHFILNVQNPVTENTEGNKKLRSVIRKNTMTYHLKKTFSWVGTKGSFVTFREEYHLTPKDDDPQSQTVLLNGVPLELTNEGEIPTMDPVQKNVHSPIYVAPLSIAFVVYPNFDASACVTNQKR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0942 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Sto12g0942 547 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 545 - -
Sto12g0942 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Sto12g0942 547 Gene3D Glycosidases 63 383 - -
Sto12g0942 547 PANTHER HEPARANASE-RELATED 1 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0942 Sto-Chr12 5848809 5852422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0942 1 541 Glycoside Hydrolase AT5G07830 61.314 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0942 K07964 - gmx:100782283 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0942 12 5848809 5852422 Sto12g0942 12 5848809 5852422 ECH