Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0920 ATGGGTCCCATTGAAGATCGATCCGAAATTGTCTTCTTCGATGTTGAAACCACCGTCCCGACCCGACCCGGTCAGGGTTTTGCCATCCTGGAGTTCGGAGCCATCTTGGTTTGCCCCAGGAAGCTGACGGAGCTCCAATTCTACTCCACATTGGTCCGACCCGCCAACCCTGCTCTCATCTCACCCATTTCCGAACGCTGCAATGGCATTACCGCCGAAGCTGTTTCGTCCGCTCCTACTTTCGCCGATATCGCCGAAACGGTTTTTGACCTTCTTCATGGACGGATTTGGGCTGGCCATAATATCATTAGATTTGACTGTGTTCGCATCAGAGATGCATTTGCTGAGATTAATCGGCCAGCACCCGAACCCAAGGGTGCTATTGACTCGTTAGTTTTATTAACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCCACTCTTGCAACATACTTTGGGCTTGGACGGCAGACACATAGGAGCTTAGATGATGTGCGGATGAATCTAGAAGTTCTCAAATACTGTGCAACTGTTCTATTCTTGGAATCAAGTCTTCCAGATGTATTCACGGTGAATTGTTGGGTTTCTCCAAATGCTACTACAAGGAGTCGTAGTAATGGAAAAACTTTACTAGATGGGAGCTCGTTAGATATGAAAAAGGAATCAGTATTGTCATCATCCCCTCCAAATCAATCTGAGGAGGAACGTCATCCAATATTTTCTCTTGCAATGCATAGCTCAGCGGGGGCTGAATCAAATATGGCAGTTACTAATATGGTTCGACAGGATCCTTTCAACTTGGCTTCTCTTTCTGATGAAATAGAAAAACCCATTCAAGAGATACCTCAGATGTCTTCTTCAGCTGCTACATCTGAATCCTGCAGCAGCTCTATCGTTGTTCTAGATCCTGATGAAATATCTATACCTTCTATTAGCGCATCTTTAGTTCCATTTTATCGTGGCAGTCAAAGGATAGAACTATTGCACAATGGTTTCCCCTTTCAGCTTTGCTGTAATCGTTTGAAAGTACGGTTCGGAGTAAGCACAAAGTTTTGTGATAGTGCCGGCCGGCCAAAGTTGAACTTAGTGATTTATGCATCGTCTAGTTTATGTAAGGCTCTTGATGCTTGTGACAGTGTAGCACAGAGGTTGTCTTTGGAGTCTGGCAGCAGCTCTGATTGGAGGCCAGTTGTTACCAGAAAAGATGGCTACCTCAACTGTCCCACCATTCGACTGCATATACCCACAGCTGTATGTGGGAACGTTGCCATATATGCAACAGAGATATACCAGAGAGAATCATCAGGCACTGTTCAAAGATTGCTTTTCAGTAAGTTTGATGCTGAAGAGCTTGGTAGCTTATTCACGCCTGGGACTTTTGTTGATGCAGTCTTTTCCTTAGATCCATATGACTATCAACAGAATGCTGGGATTAAGTTATTTGCCAAAAAATTGACCATTCATTGCAATTAG 1479 0.4442 MGPIEDRSEIVFFDVETTVPTRPGQGFAILEFGAILVCPRKLTELQFYSTLVRPANPALISPISERCNGITAEAVSSAPTFADIAETVFDLLHGRIWAGHNIIRFDCVRIRDAFAEINRPAPEPKGAIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDVFTVNCWVSPNATTRSRSNGKTLLDGSSLDMKKESVLSSSPPNQSEEERHPIFSLAMHSSAGAESNMAVTNMVRQDPFNLASLSDEIEKPIQEIPQMSSSAATSESCSSSIVVLDPDEISIPSISASLVPFYRGSQRIELLHNGFPFQLCCNRLKVRFGVSTKFCDSAGRPKLNLVIYASSSLCKALDACDSVAQRLSLESGSSSDWRPVVTRKDGYLNCPTIRLHIPTAVCGNVAIYATEIYQRESSGTVQRLLFSKFDAEELGSLFTPGTFVDAVFSLDPYDYQQNAGIKLFAKKLTIHCN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0920 492 MobiDBLite consensus disorder prediction 221 236 - -
Sto12g0920 492 CDD DEDDh 11 175 - -
Sto12g0920 492 Pfam Exonuclease 11 174 IPR013520 -
Sto12g0920 492 SMART exoiiiendus 9 183 IPR013520 -
Sto12g0920 492 MobiDBLite consensus disorder prediction 203 237 - -
Sto12g0920 492 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 491 - -
Sto12g0920 492 SUPERFAMILY Ribonuclease H-like 9 179 IPR012337 -
Sto12g0920 492 Gene3D - 5 180 IPR036397 GO:0003676
Sto12g0920 492 PANTHER PROTEIN NEN3 5 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0920 Sto-Chr12 5698572 5701798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0920 - - ccaj:109808157 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0920 12 5698572 5701798 Sto12g0920 12 5698572 5701798 ECH