Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0875 ATGACGACGCCGTTTCAGCAACAGCAGCCACCGCAACCTCCGAGAACGATCAGAAAGCTTATCGTTGAAGTAGTGGATGCACGCAATCTCCTTCCCAAGGATGGCCAGGGAAGCTCAAGCCCTTACGTCGTCGCAGACTTCGATGGACAGAGGAAAAGGACTTCCACAAGGTACAGAGAGCTCAGCCCCGTTTGGAATGAGGCTCTTGAGTTCATTGTATCTGACCCAGAAAACATGGAGTTCGAAGAGCTAGAAATCGAGGTGTACAACGACAAGAAGTTCGGAAATGGGAGTGGACGGAAAAATCACTTTCTCGGCAGAGTAAAGCTGTACGGGACTCAATTCTCCAGGAGAGGGGATGAAGGCTTGGTGTACTATACGTTGGAGAAGAAGAGCGTGTTTAGTTGGATTAGGGGTGAAATTGGCCTGAAGATTTACTACTTCGATGAATTGATGGAGGAAGATAGGCCGCCTCAGCAGCCGGAGGAGGAGCCACAGCAGCAAAATACAGAGCATGATAAGACGAAACCGCCAGGGGTAGTAGTGGTTGAGGAAGGAAGAGTGTTTGAGGTTCCTGGCCCAATGGAGCATTGCGTACCTGAAGTCCCTCATCCTCATTCACCTCGTGTTGTGGTTGTTGAAGAATCGCCGCCGCCGGTGGTCCAAGTGCCGCAGGATCAACCGATGCCGGATATGGCAGGACCACCTGTAACAGAAATGCAGTATCCTCCAGAGGTTAGAAAAATGCAGGCAGGAAGAATACCGGGAGGTGAGAGAGTTAAATTTTTGAAGAGGCCGAGTGGAGATTATTCTCCTAAGGTAATATCCGGAAAGCCCTCCGGCGTCGAGTCTGAGAGGGTTCACCCCTACGAGCTGGTTGAGCCAATGCCTTACCTATTTGTCAGAATCGTGAAGGCTCGTGGACTTGCTCCGAATGAAAGCCCCTACGTGAAGATTCGAGGTTCCAGTCATTTGCTTCGATCAAAACCTGCAATCTACCGTCCAAATGAGCCCAATGACTCACCGGAATGGAATCAGGTGTTCGCCCTCGGACATAAGGCTGACACAGCGAGCACGATTTTGGAAATTTCAGTTTGGGATTCCCCAAACGAGCAATTTCTAGGCGGCGTTTGCTTTGACCTCTCGGACGTGCCCGTACGAGACCCTCCTGATAGTCCCTTGGCTCCGCAATGGTACCACCTTGAAGGCGGCGCTGCAGAACAAAATTCCGGCCGAGTTTCCGGTGACATTCAGCTGTCCGTCTGGATTGGTACACAAGCCGATGATGCATTCCCGGAAGCATGGATCTCCGACGTACCAGACGTGGCACACACTCGCTCCAAAGTATACCAATCACCGAAGCTCTGGTATCTGCGCGTGACTATAATTGAAGCACAAGACCTCAACATCCCTCCCAATCTTCCACCATTAACGGCACCGGAGATTCGAATAAAAGTGCAATTAGGATTTCAATCCGCACGAACAAGGCGAGGATGCATGAACAACCATAGCCTATCAATCCATTGGAACGAAGACCTCCTCTTCGTGGCCGGTGAGCCTCTCGAAGATTCCATGATTCTCCTCGCAGAAGACCGTACAACCAAGGAAGCTGTGCTACTAGGCCACATTGTAATTCCACTCACCTCCATCGAGCAACGAATCGACGAGCGCCACGTGGCTTCGAAATGGTTCACCCTGGAAGGTGGCAGCGGAGGCGGACCCTACTGCGGCCGAGTCCACCTAAGAGTCTGCCTAGAGGGTGGCTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTCCGTGCGACGGCGAAGCAACTATGGAAGCCGACTATCGGAATTCTTGAACTGGGCATCTTAGGGGCTCGTGGCCTCCTTCCAATGAAACCCAAAGGAGCAGGAAAGGGGTCCACCGACGCTTACTGTGTAGCCAAGTACGGAAAGAAGTGGGTCCGAACCCGAACCATCACGGACTGCTTCGACCCACGTTGGAACGAGCAGTACACGTGGCAAGTCTACGACCCTTGCACAGTTTTGACCATCGGTGTGTTTGACAACTGGAGAATGTTCGCCGACGCGTCAGAAGAAAGACCCGATTGCCGCATCGGAAAGGTACGCATACGAGTGTCCACTCTTGAGAGCAACAAAGTCTATACAAATTCTTATCCTCTCTTAGTCTTACTTCGAACCGGGTTGAAGAAAATGGGTGAGATTGAGTTAGCGGTTCGGTTCGTGTGCCCTTCATTGTTGCCCGATACTTGTGCCATCTATGGTCAACCATTGCTTCCCAAAATGCACTACATCCGCCCACTCGGGTTAGTACAGCAGGAGGCGCTACGTGGCGCCGCCACAAAGATGGTGGCTCAGTGGCTCGCAAGGTCGGAGCCACCATTGGGACACGAAGTGGTTCGGTACATGTTGGATGCAGACTCGCATGCGTGGAGCATGAGGAAGAGTAAGTCTAATTGGTTTCGGATCGTAGCGGTTCTAGCATGGGCGGTCGGGTTAGCAAAATGGTTGGACGACATAAGGAGGTGGAGGAAGCCTGTGACCACAGTGTTGGTCCATATTCTGTACTTGGTGCTTGTTTGGTATCCAGATTTGATTGTTCCTACTGGGTTCTTATACGTGGTTTTGATTGGTATATGGTATTACCGGTTCAGACCCAGGATACCAGCGGGTATGGATACCCGGTTATCACAAGCGGAAACGGTTGACCCGGACGAGTTAGACGAGGAATTCGACACAATGCCGAGCTCGAAACCACCCGACATAATTCGGATCCGGTATGACAGGTTAAGGATGTTGGCTGCTCGGGTACAAACAGTGTTGGGGGATTTTGCAACACAGGGAGAGAGGGTTCAAGCTTTGGTGAGTTGGAGGGATCCAAGAGCGACCAAGATATTCATTGGAGTGTGTACGGTAATCACAGTAATAATGTATGTGGTGCCACCAAAAATGGTGGCAGTGGCTTTAGGATTCTACTACCTGCGACATCCCATGTTCAGGGACCCAATGCCTTCATCTACCTTGAACTTTTTCAGGCGACTTCCAAGTTTGTCTGATCGCTTGATGTAG 3084 0.5139 MTTPFQQQQPPQPPRTIRKLIVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTSTRYRELSPVWNEALEFIVSDPENMEFEELEIEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSRRGDEGLVYYTLEKKSVFSWIRGEIGLKIYYFDELMEEDRPPQQPEEEPQQQNTEHDKTKPPGVVVVEEGRVFEVPGPMEHCVPEVPHPHSPRVVVVEESPPPVVQVPQDQPMPDMAGPPVTEMQYPPEVRKMQAGRIPGGERVKFLKRPSGDYSPKVISGKPSGVESERVHPYELVEPMPYLFVRIVKARGLAPNESPYVKIRGSSHLLRSKPAIYRPNEPNDSPEWNQVFALGHKADTASTILEISVWDSPNEQFLGGVCFDLSDVPVRDPPDSPLAPQWYHLEGGAAEQNSGRVSGDIQLSVWIGTQADDAFPEAWISDVPDVAHTRSKVYQSPKLWYLRVTIIEAQDLNIPPNLPPLTAPEIRIKVQLGFQSARTRRGCMNNHSLSIHWNEDLLFVAGEPLEDSMILLAEDRTTKEAVLLGHIVIPLTSIEQRIDERHVASKWFTLEGGSGGGPYCGRVHLRVCLEGGYHVLDEAAHVCSDFRATAKQLWKPTIGILELGILGARGLLPMKPKGAGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTIGVFDNWRMFADASEERPDCRIGKVRIRVSTLESNKVYTNSYPLLVLLRTGLKKMGEIELAVRFVCPSLLPDTCAIYGQPLLPKMHYIRPLGLVQQEALRGAATKMVAQWLARSEPPLGHEVVRYMLDADSHAWSMRKSKSNWFRIVAVLAWAVGLAKWLDDIRRWRKPVTTVLVHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPRIPAGMDTRLSQAETVDPDELDEEFDTMPSSKPPDIIRIRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKIFIGVCTVITVIMYVVPPKMVAVALGFYYLRHPMFRDPMPSSTLNFFRRLPSLSDRLM 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0875 1027 MobiDBLite consensus disorder prediction 154 171 - -
Sto12g0875 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 19 165 IPR035892 -
Sto12g0875 1027 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Sto12g0875 1027 CDD C2A_MCTP_PRT_plant 19 149 - -
Sto12g0875 1027 CDD C2C_MCTP_PRT_plant 457 604 - -
Sto12g0875 1027 MobiDBLite consensus disorder prediction 154 179 - -
Sto12g0875 1027 CDD C2D_MCTP_PRT_plant 616 743 - -
Sto12g0875 1027 CDD C2B_MCTP_PRT_plant 298 425 - -
Sto12g0875 1027 SMART C2_3c 616 723 IPR000008 -
Sto12g0875 1027 SMART C2_3c 457 559 IPR000008 -
Sto12g0875 1027 SMART C2_3c 298 393 IPR000008 -
Sto12g0875 1027 SMART C2_3c 19 126 IPR000008 -
Sto12g0875 1027 Pfam Plant phosphoribosyltransferase C-terminal 872 1027 IPR013583 -
Sto12g0875 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 456 605 IPR035892 -
Sto12g0875 1027 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 16 1027 - -
Sto12g0875 1027 Pfam C2 domain 298 400 IPR000008 -
Sto12g0875 1027 Pfam C2 domain 19 111 IPR000008 -
Sto12g0875 1027 Pfam C2 domain 456 566 IPR000008 -
Sto12g0875 1027 Pfam C2 domain 615 726 IPR000008 -
Sto12g0875 1027 Gene3D C2 domain 15 178 IPR035892 -
Sto12g0875 1027 ProSiteProfiles C2 domain profile. 598 724 IPR000008 -
Sto12g0875 1027 Gene3D C2 domain 439 585 IPR035892 -
Sto12g0875 1027 Gene3D C2 domain 597 748 IPR035892 -
Sto12g0875 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 615 767 IPR035892 -
Sto12g0875 1027 ProSiteProfiles C2 domain profile. 436 564 IPR000008 -
Sto12g0875 1027 ProSiteProfiles C2 domain profile. 279 399 IPR000008 -
Sto12g0875 1027 PANTHER BNAA10G16860D PROTEIN 16 1027 - -
Sto12g0875 1027 Gene3D C2 domain 294 423 IPR035892 -
Sto12g0875 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 298 438 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0875 Sto-Chr12 5477556 5480639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0875 2 1027 Lipid Metabolism Gene Families AT1G74720 72.535 0.0 1575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0875 - - gmx:100783882 1689.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0875 12 5477556 5480639 Sto12g0875 12 5477556 5480639 ECH