Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0873 atgggaaatCTTCTCTGTTGTATACAAGTTGAACAATCCACGGTGGCTATAAAAGAAAGATTTGGAAAGTTTGAAGATGTACTTGAGCCAGGATTCCATTGCATGCCATGGATCCTTGGATATCAACTTTCTGGCCATCTCTCTCTTAGGCTACAGCAGTTGGATATTCGATGTGAGACAAAGACAAAGGATAATGTATTTGTTAATGTTGTTGCTTCTGTTCAATATCGTGCCCTGGCAGACAAGGCCAACGATGCTTTTTACAAACTTAGCAATACAAGATCCCAAATCCAAGCTTATGTTTTTGATGTAATCAGAGCAAGTGTTCCAAAGCTAGATTTGGATGATGCTTTTGagcagaaaaatgaaattgCCAAAGCTGTGGAGGAAGAACTTGAGAAGGCTATGTCAGCTTATGGGTATGAAATTGTTCAAACACTGATTGTTGATATAGAGCCAGATGAGCATGTCAAGCGGGCTATGAATGAAATCAATGCAGCTGCAAGATTGAGGGTGGCAGCTAATGAGAAAGCAGAGGCAGAGAAAATCCTGCAAATTAAGCGAGCTGAGGGTGAGGCTGAGTCAAAGTATCTCTCCGGACTGGGTATTGCTCGCCAACGTCAAGCAATTGTGGATGGCTTAAGAGATAGTGTGCTTGGATTCTCAGTTAATGTACCAGGGACTACTGCTAAAGATGTCATGGACATGGTCCTTGTTACTCAGTATTTTGACACCATGAAAGAAATTGGTGCTGCCTCCAAGTCTTCTGCTGTGTTCATTCCTCATGGACCTGGAGCTGTCCGTGATGTAGCCACTCAAATTCGCGACGGACTTCTTCAGGCTTCTCATCACTAG 855 0.4187 MGNLLCCIQVEQSTVAIKERFGKFEDVLEPGFHCMPWILGYQLSGHLSLRLQQLDIRCETKTKDNVFVNVVASVQYRALADKANDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVATQIRDGLLQASHH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0873 284 SUPERFAMILY Band 7/SPFH domain 46 171 IPR036013 -
Sto12g0873 284 Coils Coil 114 138 - -
Sto12g0873 284 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 284 - -
Sto12g0873 284 SMART PHB_4 5 165 IPR001107 -
Sto12g0873 284 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Sto12g0873 284 Coils Coil 157 190 - -
Sto12g0873 284 CDD SPFH_like_u4 10 278 - -
Sto12g0873 284 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1-LIKE 1 284 - -
Sto12g0873 284 Gene3D Band 7 domain 41 167 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0873 Sto-Chr12 5471477 5473000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0873 - - mnt:21391037 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0873 12 5471477 5473000 Sto12g0873 12 5471477 5473000 ECH