Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0852 ATGTCTTTCGGTCTTCACATTCTCTTTCTGTTTTTCTTCTTCATATCACATCCTCTGATCAAGTCCTCTTCACCTCACACCTTTGCTGCTAACTCAGGAACGCCTTCTAAATCAGAACCTCTCAAGGGTCTATGCTTGGAGAAAATTGGAAATGGGAGTTACCTTAGTATGGTTCCACATCCTGATGGTTCAAACCGTGCATTTTTAGCAAACTTGCAAGGCAAGATATGGTTAGCTTCAATTCCTGATGAGGGGTCTAATGGGATTCTGGAATTTGATGAATCCAAACCCTTCCTAGACATTAGTGACAATATTCTCTTCGATTCTAGCCACGGTTTAATGGGAATTGCATTTCACCCAAACTTTGCACACAATGGTCGCTTCTTTCTCTCATATACTTGTGATCAGACAAAGAATCTTGGCTGTTCTGGGAGATGTGCTTGTAACACAAATGTCAATTGTGACCCTTCAAAACTTGGTTCTGATGATGCTGGTGTCCTGCCATGCCAGTATCATGCTGTAGTTGCAGAGTTTACAGTCAATGGCACAGCATCAGAGCCTTCCTTGGCAGAAAGTGGGAATCCATTGGAAGTTAGAAGGATATTCACAATGGGTGTTCCGTACAGAGGAGGTCATGCTGGTCAGATTCTCTTTGGACCAGAAGATGGGTACTTGTACCTCATGATTGCAGATGGTTCTAATCGTGATGATCCTTACAATTTAGCCCAGAACAAGAAATCCTTACTGGGAAAGATTTTGAGAATTGATGTAGATAATCTGCCTAGTACCAAAGAAATAAACAATCAAGGGTTATGGGGAAACTATTCAATACCTAGAGATAATCCATATTTTGCAGACAAGGAGCTTGAGCCAGAGATATGGGCTTTGGGTTTCAGGAACCCTTGGCGTTGTAGTTTTGACTCCAAGAGGCCCTCCTATTTTCTGTGTGGAGATTCAGGCCAGGACCAATATGAAGAGATTGATGTGGTTATGAAGGGTGGGAACTATGGGTGGCGAGTCTATGAGGGCCCTTTTCTTTTCCACCCATCAGAATCTCCTGGAGGAAATACCTCTGCCTCTTCCATACACCCTATCTTTCCTGTATTGGGGTATACTCATTCTGAGATTGATAATATATCTGGTTCTGCGTCCATTGTTGGTGGCTATTTTTATCGCTCCATCACTGATCCTTGTATGTATGGAAGGTACTTGTACACAGATTTGTATGGAGTATGTGCTCTGGTGGGCACAGAGAGACCTGAAAGCAGTGGAAACTTCACGAAGGCTAAAATTTCTTCTACATGTGCTCATGACTCTCCAATGCAGTGTTCTTTTGTGCAAGGAAGTTCTACCCCTCAATTGGGCACGACCAAGCCGTTGTAG 1383 0.4309 MSFGLHILFLFFFFISHPLIKSSSPHTFAANSGTPSKSEPLKGLCLEKIGNGSYLSMVPHPDGSNRAFLANLQGKIWLASIPDEGSNGILEFDESKPFLDISDNILFDSSHGLMGIAFHPNFAHNGRFFLSYTCDQTKNLGCSGRCACNTNVNCDPSKLGSDDAGVLPCQYHAVVAEFTVNGTASEPSLAESGNPLEVRRIFTMGVPYRGGHAGQILFGPEDGYLYLMIADGSNRDDPYNLAQNKKSLLGKILRIDVDNLPSTKEINNQGLWGNYSIPRDNPYFADKELEPEIWALGFRNPWRCSFDSKRPSYFLCGDSGQDQYEEIDVVMKGGNYGWRVYEGPFLFHPSESPGGNTSASSIHPIFPVLGYTHSEIDNISGSASIVGGYFYRSITDPCMYGRYLYTDLYGVCALVGTERPESSGNFTKAKISSTCAHDSPMQCSFVQGSSTPQLGTTKPL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0852 460 Pfam Glucose / Sorbosone dehydrogenase 58 342 IPR012938 -
Sto12g0852 460 PANTHER HEDGEHOG-INTERACTING PROTEIN 36 456 - -
Sto12g0852 460 Gene3D - 50 427 IPR011042 -
Sto12g0852 460 PANTHER HIPL1 PROTEIN-LIKE 36 456 - -
Sto12g0852 460 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 51 350 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0852 Sto-Chr12 5345973 5349011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0852 - - pvy:116127279 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1491 3 10985540 10989527 Sto12g0852 12 5345973 5349011 CCT
Sto3g1491 3 10985540 10989527 Sto12g0852 12 5345973 5349011 ECH
Sto12g0852 12 5345973 5349011 Sto12g0852 12 5345973 5349011 ECH