Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0850 ATGATGCACCTTAAGATGACAGAGATGTGGGCGACAATGGGGTCGACCATAGCCAGCTTCATGTTCGTGTGGGCAATCATTCGACAATACTGTCCGTACGAGGTTCGGCGTTTCTTCGAGAAGTACACACACAGGGTCATGGGATACTTCTGCCCTTACATTCGAATCTCCTTCCACGAATTCATGGGAGATCGTCTCAAACGCAGCGAAGCatatgcggccgtggaggcatATCTCAGCGCCAACACATCAAAGAGCGCCAAGAGGCTCAAAGCAGAGATGGGTAAAGACAGCAGCAACCTCGTACTAACCATGGACGAGTACGAGAGAGTGACGGATGAGTTTCAGGGGGTGAAGGTTTGGTGGGTTTCGAGCAAAATCATGTCTCCGACGAGGTCCATGTCGTATTATCAAGAGCAGGAGAAGAGATTCTATAAGTTGACTTTCCATTACAAAAACAGAGACACCATCGCTGGGTCGTATTTGGAGCATGTGATGAGAGAAGGGAAGGAGATTCGATTGAGGAATAGGCAGAGGAAGCTGTATACCAACAGTCCTGGCTATAAGTGGCCGAGTTATAAGCAGACAATGTGGAGTCACATTGTGTTTGAGCACCCTGCTACCTTCGAAACAATGGCTATGGAGcctgagaagaagaaggagatcaTTGAGGATTTGGTTACTTTCAGTAAAAGTAAGGATTTTTATGCTAGAATTGGGAAAGCATGGAAAAGGGGTTATCTTTTGTATGGCCCTCCTGGTACTGGGAAATCCACCATGATAGCAGCAATGGCTAATTTGTTGGGGTACGATGTGTATGATCTTGAGCTTACTGCAGTGAAGGATAACACAGAGCTGAGGAAGCTTTTGATTGAGACGACCAGTAAGTCCATAATTGTGATCGAGGACATTGATTGCTCTCTTGATCTTACAGggcagaggaagaagaaagcagAGATGGGTTTAGATGATGATGGGGATAAGGTGAATGCAGAAGCAGGAAGGAAAGAAGCAAAGGAAGAAGGAGGTGGTGGTAGTAGCAGTAAAGTGACTCTTTCAGGACTTTTGAATTTCATAGATGGGATTTGGTCTGCATGTGGAGGggagagattgattgtgttcaCAACTAATTATGTGGAGAAGCTTGATCCTGCACTTATCAGAAGGGGTCGAATGGACAAGCATATAGAGCTGTCATATTGTAGTTTTGATGGGTTCAAAGTGCTTGCCAAGAACTACTTGAAGGTTGAAACGCATCCTATGTTTGACACAATAAAGAGGTTGATAGGGGAGATCAAGATTACCCCAGCTGATGTTGCTGAGAATCTCATGCCTAAATCTCCAACGGATGATGCAGAGAAATGCCTTTCAAGTTTGATTGAAGCGCTTGAGGAAGCAAAGGAAGCTGCAACTACTGCAACAAAAGCAGAGGAACTGAAACAGAGTAGTCTCATTAGGGAAAATGGTGAGCTTCAAGATGACAAAGAAACTGCCAAGGCAATGAAGAACAACCATTGCCAGCGATAG 1527 0.425 MMHLKMTEMWATMGSTIASFMFVWAIIRQYCPYEVRRFFEKYTHRVMGYFCPYIRISFHEFMGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSSNLVLTMDEYERVTDEFQGVKVWWVSSKIMSPTRSMSYYQEQEKRFYKLTFHYKNRDTIAGSYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKAEMGLDDDGDKVNAEAGRKEAKEEGGGGSSSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFDGFKVLAKNYLKVETHPMFDTIKRLIGEIKITPADVAENLMPKSPTDDAEKCLSSLIEALEEAKEAATTATKAEELKQSSLIRENGELQDDKETAKAMKNNHCQR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0850 508 MobiDBLite consensus disorder prediction 470 508 - -
Sto12g0850 508 Pfam ATPase family associated with various cellular activities (AAA) 248 399 IPR003959 GO:0005524|GO:0016887
Sto12g0850 508 PANTHER ATP BINDING PROTEIN 7 495 - -
Sto12g0850 508 MobiDBLite consensus disorder prediction 320 343 - -
Sto12g0850 508 PANTHER BCS1 AAA-TYPE ATPASE 7 495 - -
Sto12g0850 508 SMART AAA_5 243 402 IPR003593 -
Sto12g0850 508 CDD AAA 244 400 - -
Sto12g0850 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 469 IPR027417 -
Sto12g0850 508 Coils Coil 456 480 - -
Sto12g0850 508 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Sto12g0850 508 Gene3D - 199 396 IPR027417 -
Sto12g0850 508 MobiDBLite consensus disorder prediction 470 502 - -
Sto12g0850 508 Gene3D - 397 460 - -
Sto12g0850 508 MobiDBLite consensus disorder prediction 320 348 - -
Sto12g0850 508 ProSitePatterns AAA-protein family signature. 370 389 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0850 Sto-Chr12 5334304 5335830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0850 208 425 Miscellaneous Gene Families AT5G58870 28.440 1.88e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0850 - - gmx:100798981 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0850 12 5334304 5335830 Sto12g0850 12 5334304 5335830 ECH