Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0837 ATGGTTTCTGATTCAATTCCCACCGCTCCGATTCCTTCAGCCGCGAACACGAAAAATTTGGGCAAGAAGAAGAGGACCAACAGGTCGGCTAAATTGAAGCAGTGTAAAATTGATGCTCGTCGTGAGCAATGGCTTTCTCAAGGTGCGGTCAAGAACAAAGGGTACAAGGACGGTGGAGACGATAATCACGCGCCACCAATGCATGCTAGGAAAGATGGCAAACGTTCATTGGAGGAACTGGAGATGAGGCCTACAGGCGAGGAGAATGACGGATCTATCCATCAAGACAGCGATTTGGAATCGCCATCCTACAGTCCAACCAGTGTTAACAGTAGCCTGTTGGGCGGTAATAATTCTGGAACACATTTCACTGCTAGTAGTAGCAGCAGCAGTAGTGCTGGATGCTGCTCTGGGAATATCacaggctTAGATGATTGGGAGGCTGTGGCTGACGCTTTAGCCGCCGATGAGAAGCATCAAAACCTGTGTTCGGAGACGCTCCCTGAACATAAAACTGTTGTGCAAATGGTTTCATCGTGTGAAATGGAATACGGGTCGAATTTAGGAACGCGGGAATCAAAACCTGAGAGTGCTTTATTAATTTCGCCTGCCTCTGGTAATAGCCGAGCTTGGAGGCCTGATGATGCTTTTCGCCCTCAGAGTTTGCCCAATCTGTCGAAGCAGCTCAGTTTACCAAATCCTGACCGGCATTGTGGAGGAGGGATCACGTGGGCTCGTACTGCTCCGCCATATTCATGTCCAATATGCTGTGAGGATCTGGATTTGACAGACTCAAGTTTTATACCTTGCCCTTGTGGGTTCCGGCTATGCCTTTTTTGCCATAAGAGGATTATTGAGGACGATGGCCGCTGTCCTGGGTGCAGGAAGCCATATAAGTGTGAATCTATTGAGACAGAGGCGAGAATGCTTGGAGGCAGCTTGACTCTTCGGTTGGCTCGTTGCTGTAGCATGATCGAAAGGTCTTGA 987 0.4853 MVSDSIPTAPIPSAANTKNLGKKKRTNRSAKLKQCKIDARREQWLSQGAVKNKGYKDGGDDNHAPPMHARKDGKRSLEELEMRPTGEENDGSIHQDSDLESPSYSPTSVNSSLLGGNNSGTHFTASSSSSSSAGCCSGNITGLDDWEAVADALAADEKHQNLCSETLPEHKTVVQMVSSCEMEYGSNLGTRESKPESALLISPASGNSRAWRPDDAFRPQSLPNLSKQLSLPNPDRHCGGGITWARTAPPYSCPICCEDLDLTDSSFIPCPCGFRLCLFCHKRIIEDDGRCPGCRKPYKCESIETEARMLGGSLTLRLARCCSMIERS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0837 328 MobiDBLite consensus disorder prediction 1 115 - -
Sto12g0837 328 MobiDBLite consensus disorder prediction 1 15 - -
Sto12g0837 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 309 IPR013083 -
Sto12g0837 328 SUPERFAMILY RING/U-box 249 304 - -
Sto12g0837 328 MobiDBLite consensus disorder prediction 96 115 - -
Sto12g0837 328 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 13 326 IPR039780 GO:0004842|GO:0030014
Sto12g0837 328 CDD mRING-HC-C4C4_CNOT4 253 296 IPR039515 -
Sto12g0837 328 MobiDBLite consensus disorder prediction 54 95 - -
Sto12g0837 328 ProSiteProfiles Zinc finger RING-type profile. 253 295 IPR001841 -
Sto12g0837 328 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 326 - -
Sto12g0837 328 MobiDBLite consensus disorder prediction 188 216 - -
Sto12g0837 328 Pfam RING/Ubox like zinc-binding domain 253 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0837 Sto-Chr12 5246855 5248071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0837 - - ahf:112695276 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0837 12 5246855 5248071 Sto12g0837 12 5246855 5248071 ECH