Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0826 ATGCTGCTTAGTCGCGGCATGGTATTTAATTTGCAGTTTTCCGGTGGGACTTTTTTCAAACACTTTACGACTTGTAAATCAACTACCACTACCGCTACCAAATCCATATCTACTACCGTCTTCAACTCCCTCTCTCACTTCACAGCCCTAACCTCTCCTCAGAAGCACCAGATTCATCTCTATGTTGATGCTCTTCTTCAATGGAACAAGCGGATGAATCTTACTGCTGTTAAAGAGGTAGATGAAGTAATGGAACGGCACGTGGAGGATTCTCTTGCGATTTTACAGCCTTTGAGGGATTCCTATCGCTCACATTGCGGCGTTCCCGATGATAAACTGAAACTCGTCGATGTTGGAACTGGTGCGGGGCTTCCTGGAATAATTTTGGCTATTGCTTGCCCAGAATGGGATGTGACGCTGATGGAATCTATGAACAAGCGATGCGTCTTCTTGGAGCACGCTGTCGGTGTTACTGGATTGTCAAACATCCAAATCGTCAGAGGAAGAGCAGAGAATTTGGGGCAGAATCTTTGCTTCAGAGAGAAATTTGACATAGCAGTAGCAAGGGCAGTtgcagaaatgagaatattaGCTGAGTATTGTCTTCCATTGGTTCGTGTTGGTGGATTGTTTGTAGCTGCCAAAGGTTATCAACCTGAGGAGGAAGTGAGGAAAGCTGAAGGTGCAATCGAAAAGATGGGTGCATTTTTATCGCAAGTATGCTCAGTGCAATCGCAAAGCCCATATGGTCAGCGAACTGCTGTCATTTGCATAAAAGACCGTCCCACCCCAATGAAGTATCCCCGGGATCCTGGTATACCGACGAAAGAACCACTGTAA 840 0.45 MLLSRGMVFNLQFSGGTFFKHFTTCKSTTTTATKSISTTVFNSLSHFTALTSPQKHQIHLYVDALLQWNKRMNLTAVKEVDEVMERHVEDSLAILQPLRDSYRSHCGVPDDKLKLVDVGTGAGLPGIILAIACPEWDVTLMESMNKRCVFLEHAVGVTGLSNIQIVRGRAENLGQNLCFREKFDIAVARAVAEMRILAEYCLPLVRVGGLFVAAKGYQPEEEVRKAEGAIEKMGAFLSQVCSVQSQSPYGQRTAVICIKDRPTPMKYPRDPGIPTKEPL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0826 279 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 47 256 IPR003682 GO:0005737|GO:0006364|GO:0008649
Sto12g0826 279 CDD AdoMet_MTases 114 212 - -
Sto12g0826 279 Pfam rRNA small subunit methyltransferase G 55 245 IPR003682 GO:0005737|GO:0006364|GO:0008649
Sto12g0826 279 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 6 279 IPR003682 GO:0005737|GO:0006364|GO:0008649
Sto12g0826 279 Gene3D Vaccinia Virus protein VP39 25 279 IPR029063 -
Sto12g0826 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 279 IPR029063 -
Sto12g0826 279 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 60 251 IPR003682 GO:0005737|GO:0006364|GO:0008649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0826 K03501 - gmx:100818428 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0826 12 5198304 5201631 Sto12g0826 12 5198304 5201631 ECH