Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0819 ATGGCAGGAGGAGCTCCAGCACCCAAAGCAGATGAACCACTGCCACACCCACCAAAGGATCAGCTTCCGAATATTTCTTATTGCATTACCAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTTGGCACAACTGTGCTCATTCCCACGGCTCTTGTTCCCCAGATGGGAGGCGGCAATGAGGAGAAGGCAAAAGTTATCCAAACACTACTCTTCGTTGCTGGTATAAACACATTGCTGCAAACACTCTTTGGAACTCGACTGCCTGCAGTAATTGGAGGGTCTTATACCTTTGTTCCAACCACTATCTCCATTATACTTGCTGGTCGATTTAGTGATGTTGCAGATCCTATAGAGAGGTTCAAGAGGATAATGCGGGCAATCCAGGGAGCTCTTATTGTTGCTTCAACTCTTCAAAtagttttaggctttagtggCCTATGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCTGCAGTTCCTCTGGTATCTCTTGTTGGTTTTGGGCTGTACGAGTTAGGTTTTCCAGGGGTTGCTAAATGTGTGGAGATCGGATTGCCAGAGCTTATATTGCTAGTATTTGTTTCACAGTACGTGCCCCACGTGCTACACTCAGGAAAACATATCTTTGACCGTTTTGCTGTTCTATTTACAATTGCATTAGTGTGGATATATGCTCATCTACTCACTGTTGGAGGGGCCTATAACAATGCTGCACCTAAAACACAAGCAACCTGCCGCACCGATCGTGCTGGACTGATAGATGGTGCTCCATGGATCAGAGTTCCATATCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGCGAAGCCTTTGCCATGATGATGGCTTCATTTGTTGCACTTGTGGAGTCCAGTGGAGCTTTTATTGCTGTGTATAGATATGCTAGTGCAACACCATGTCCGCCATCTATTCTCAGTCGGGGTATCGGCTGGCAGGGTGTTGCCATTCTTTTATCAGGATTGTTCGGAACTGTCACTGGATCCTCAGTATCTGTAGAAAATGCTGGTCTTTTGGCTTTGACCCGTGTTGGCAGTCGAAGAGTTGTGCAAATATCAGCTGGATTTATGATCTTCTTTTCGATTCTCGGAAAATTTGGAGCAGTTTTTGCCTCTATTCCACCCCCCATTATTGCTGCTCTGTACTGCTTGTTCTTTGCCTATGTTGGTGCTGGAGGTCTCAGTTTTCTTCAATTCTGCAACCTCAACAGTTTTAGAACAAAGTTCATCCTAGGCTTCTCCATCTTCCTGGGGCTGTCTATACCACAGTACTTCAACGAGTACACAGCAATCAATGGTTTTGGTCCAGTCCACACAAATGCAAGATGGTTCAATGACATAGTGAACGTGCCATTCCAATCAGAAGCATTTGTTGCAGGTTGTGTGGCATATTTTCTGGACAACACCATACACAAGAAAGATGGGGCAATCAGGAAAGACAGAGGAAAGCATTGGTGGGACAAGTATCGTTCTTTCAAAGGAGACACAAGGAGTGAGGAATTCTATTCTCTGCCTTTCAATCTAAACAAATACTTCCCTTCTGTGTAA 1596 0.4455 MAGGAPAPKADEPLPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSDVADPIERFKRIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQYVPHVLHSGKHIFDRFAVLFTIALVWIYAHLLTVGGAYNNAAPKTQATCRTDRAGLIDGAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPCPPSILSRGIGWQGVAILLSGLFGTVTGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTNARWFNDIVNVPFQSEAFVAGCVAYFLDNTIHKKDGAIRKDRGKHWWDKYRSFKGDTRSEEFYSLPFNLNKYFPSV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0819 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 531 - -
Sto12g0819 531 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 531 - -
Sto12g0819 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0819 Sto-Chr12 5159104 5163565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0819 7 531 Organic Solute Cotransporters AT5G49990 82.510 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0819 - - gmx:100791553 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1445 3 10602826 10609849 Sto12g0819 12 5159104 5163565 CCT
Sto12g0819 12 5159104 5163565 Sto12g0819 12 5159104 5163565 ECH