Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0807 ATGGTTAACACTGATTCCATTAGAACCGTCGTTGGGATAATTGGAAATGTCATCTCTTTTGGATTGTTCTTGTCGCCCCTGCCAACGTTTGTGAAAATATTCAAAGCAAAATCAGTGGAAGAGTTCAAGCCAGATCCGTATTTGGCCACAATCCTGAATTGTATAATGTGGTCTTTCTATGGGTCCTCTCTTGTGAGTGAAGATAACATTCTTGTGCTAACTATTAATGGCATAGGCTTCTTCATTGAGGTCTTCTATACTCTCATCTTCTTTACTTACTCCAATTGGAATAAACGCAAGAAGATCCTCATTGTCCTCTTCATTGAAGCCATTTTCACTGTAGTAGTGATATTCTGTACCTTGCACTTCGTTCACACTCTCAAGCAGAGGACCATGATCATTGGGATTATTTGCATAGTCTTCAATATCCTTATGTACTTTTCACCCTTAACTGTCATGCGATTGGTGATTAAAACAAAGAGTGTGAAATACATGCCTTTCTTACTTTCACTTGCAAACTTCGCCAATGGACTCATCTGGGTGATCTATGCTGCCTTCAGATGGGATCCCTACCTTGTGATCCCCAATGGTTTGGGAGCACTTTCTGGATTGGTGCAGCTCATCCTCTATGCTTGTTACTACAAAACAACCGACTGGGGAGAGGACAGACCACAATTCGAAATGAGCAAGGtctaa 696 0.4095 MVNTDSIRTVVGIIGNVISFGLFLSPLPTFVKIFKAKSVEEFKPDPYLATILNCIMWSFYGSSLVSEDNILVLTINGIGFFIEVFYTLIFFTYSNWNKRKKILIVLFIEAIFTVVVIFCTLHFVHTLKQRTMIIGIICIVFNILMYFSPLTVMRLVIKTKSVKYMPFLLSLANFANGLIWVIYAAFRWDPYLVIPNGLGALSGLVQLILYACYYKTTDWGEDRPQFEMSKV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0807 231 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Sto12g0807 231 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016021
Sto12g0807 231 PANTHER RAG1-ACTIVATING PROTEIN 1 5 225 - -
Sto12g0807 231 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 5 225 - -
Sto12g0807 231 Gene3D - 127 218 - -
Sto12g0807 231 Gene3D - 6 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0807 Sto-Chr12 5085983 5087160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0807 1 194 Miscellaneous Gene Families AT5G62850 62.887 3.38e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0807 K15382 - twl:119986917 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0807 12 5085983 5087160 Sto12g0807 12 5085983 5087160 ECH