Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0805 ATGCAACAAACAAACCCATTTACTCCCAGAGCCTCTCTGGTTCGCTATTGGAACACCCACGTCTCCAACAAACTCCCAATCCCTCAATTCCTCGTTTCTAAAGCGTCTCCTCTCACCCCTCGTGACTACGCCTTCTTCAGAAAACTCGTCTCCCACAAAACCCTCTCTTCACGCTTCGAATCCTTTTGCACATTAGCCAACTTGTACTGCTCCTTCGACGATTCATCCAAGGATGCAATCCACCGCACCAACAACGACGACGCCAACTTCGCCCTCTACTCCAACAAACGATTCACGAACTACGGGTCGTCCAGAGTCGCCGGAGTTGACTCCTTCAAGAACTACTCCGGCGGGTTGAACACAGTCACCGATTCCTTCAAGAAATACAGTCAAGCCTCCACCCGCCACAGTGAACGCTTCACCAACTACGCAGAGAATACCAATGTAGCCAATACCAACTTCACCAGCTACGGCTCCAAAGCCACCGCCGGCTCCGGCAACTTCAACAACTACGACAAGCTCGTGAACGTTCCGAATCTCGGATTCGCTTCCTACGACTCCGGTGCCGTCAACCGCCAGATGTCATTCTCCAGCTATGGCAACGAGACGAACTCCGGTGGCCAATCATTCACCAGCTACGGCAAGAGCGCGCGTGCGGGACCCACCGATTTCACCAACTACGCGGTTAGCTCCAATATTCTGCAATCGGACTTTACGGGTTACGGCGAGTCGGGTGGTAGAGTAAACAACACCTTCAAATCCTACGGTTCATCGGGTAATAACCCGAGATCCACTTTTAAGACATACGGTTCCGGGTCAAACTCCGGATCCGACACATTCACGAGCTACCGGAACGGTGCGAATGTGGGTCAGGATTCCTTCGAGAACTATGCTGCAAAATCTAACTCCGGCTCAGCCAGCTTCGAGAACTACGGGAAATCGTTCAACCCTGGTAACGACAGTTTCAAAGGATACGGTAAGGGATCCGTGGGTCGGACCATAATCGGGTTCAAGTCATACAGCGTGGGTCGGAGtttcaaagattataacaaGCAGGGCGTGTGGTTTTCGCAATACAGTAATTTGAGCGCGTCCAGTGGCAAAATGGTGAATAAGTGGGTGGAAGCGGGCAAATTTTTCAGGGAGTCGATGATGAAGGAAGGAAATGTGATGGTAATGCCTGACATTAGAGACAAGATGCCTTCAAGGTCGTTTTTGCCCGGGGCTATTTCGTCAAAACTACCGTTCTCGTCGTCGTTGGTGGGTGAGATGAAGGAGGTGTTTCACGCGCGGAGGGGATCGGCGATGGAGCGCGTGATGATTCGAGCTTTGGAGGAGTGCGAGAGGAGTCCAAGCCCGGGTGAGACGAAACGGTGCGTAGGGTCGGGGGAAGCGATGATAGAATTCGCGGTTTCGGTGCTGGGGCCCAATGTAGTATTGAGGAAGACGGAGAATGTGAGAGGGTCAAGGAGGAGGGTGATGATTGGAAGAGTCAAAGCGATAAACGGTGGAAAAGTAACGAAATCAGTGTCATGCCATCAGAGTTTGTACCCGTATCTACTGTATTATTGTCACTCTGTACCTAAGGTGAGAGTTTATGAGGCTGACATACTTGACGTCGACTCTAAGGCGAAGATCAATCATGGGGTTGCCATTTGTCATCTCGACACGTCAGCGTGGGGCCCGGAGCATGGGGCCTTCGTGGCACTGGGGTCCACTCCCGGGAAAATCGAAGTGTGCCACTGGATTTTCGAGAACGACGTGACGTGGACGATCGGTGATTGA 1785 0.5165 MQQTNPFTPRASLVRYWNTHVSNKLPIPQFLVSKASPLTPRDYAFFRKLVSHKTLSSRFESFCTLANLYCSFDDSSKDAIHRTNNDDANFALYSNKRFTNYGSSRVAGVDSFKNYSGGLNTVTDSFKKYSQASTRHSERFTNYAENTNVANTNFTSYGSKATAGSGNFNNYDKLVNVPNLGFASYDSGAVNRQMSFSSYGNETNSGGQSFTSYGKSARAGPTDFTNYAVSSNILQSDFTGYGESGGRVNNTFKSYGSSGNNPRSTFKTYGSGSNSGSDTFTSYRNGANVGQDSFENYAAKSNSGSASFENYGKSFNPGNDSFKGYGKGSVGRTIIGFKSYSVGRSFKDYNKQGVWFSQYSNLSASSGKMVNKWVEAGKFFRESMMKEGNVMVMPDIRDKMPSRSFLPGAISSKLPFSSSLVGEMKEVFHARRGSAMERVMIRALEECERSPSPGETKRCVGSGEAMIEFAVSVLGPNVVLRKTENVRGSRRRVMIGRVKAINGGKVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADILDVDSKAKINHGVAICHLDTSAWGPEHGAFVALGSTPGKIEVCHWIFENDVTWTIGD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0805 594 MobiDBLite consensus disorder prediction 252 276 - -
Sto12g0805 594 ProSiteProfiles BURP domain profile. 379 593 IPR004873 -
Sto12g0805 594 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 3 594 - -
Sto12g0805 594 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 3 594 - -
Sto12g0805 594 SMART BURP_2 377 593 IPR004873 -
Sto12g0805 594 Pfam BURP domain 379 591 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0805 Sto-Chr12 5076090 5077874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0805 - - lja:Lj1g3v0411530.1 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0805 12 5076090 5077874 Sto12g0805 12 5076090 5077874 ECH