Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0776 ATGAGATGCTTCAAACTATTACCCTTTTCCAAAAAATCGCCGTTGGACCAGCTTCTTGTCGACGGGTTCGACGCCGAGCAGATATGGCAGCAAATTGATCTCCAATCACAGCCCCTTTTACCCTCTCTTCGCCGGAGAGTGAACCGCCTGCAGAAGAATCCCGAAGAAATTTCTAAGCTGAGGGAGGCTTTACAAGGTGAAAAGAAGGCGGAGGGGAAAACTAGAGAAGAGTGGAACGATGAAAGCGATGGCTTTGATGAGGAATTAGATGAATACGACGAGGAAGAAAGCGCAGCAGAGGATAAAAAGGAAGGCGAGATAAGAAAAGAAgcagagtcagaggatgatgaggaggaagaagacgaGGATGAtgaagaggaggaagaggatgaGGAGGGCGTTGAGAGGGAAGAAAGTAAGAGTGAGGAGGAGAACGAGGAAGCCGACGGTGGAGGTATTGAGGATAAATTTCTGAAAATAAAGGACTTGGCAAAGTACTTGCAGGAGGAGGAGGATAATTTGGAGAATGATGTAGCAGGAAAGTTAAACGACGATGAGGAAGGTAGTGAAGATGACGATGAAAGTGATGAGGCTGGTGAATTTGGGCTTGGTGATGATGAGGACGGAGATGAAGACGCAGAGGACTTGGAAAATGCAAGGTACGAAGACTTCTTTGGTGCTAAAAAGGAGAAGGGTTCAAAAAGAAAAGGCCGGTTAATTCATGGGTCTGAGGATTCTGATGATGGTGACATGAAATTTGACAGACAGAAGCAAGAGACCATTTCAACCCATGAAAAACAAATGGAGAAGATCCAATCAAAGATAGAGCAGATGGAGAATGCTAACTTGGAGCCAAAAACTTGGACCATGCAGGGAGAGGTAACTGCAGCAAAGAGACCCAAAAATAGTGCATTGGAAGTTGATCTGGACTTTGAGCACAATGTGAGACCAGCTCCTGTAATCACCGAGGAGGTTACAGCTTCAATTGAGGATATGATACAGAAAAGGATCCTTGAGGGGCGTTTTGATGATGTTCAAAGGGCTCCAAAATTGCCATTAAAAGCGCCTAGGGAAGTAAAAGAGTTGGATGAGAATAAAAGCAAGAAGGGTCTTGCAGATATTTATGAGGAAGAATATGTTCAAAAGACGGACCCTGCTTCTGCTCCATTGTCATTCAAAGATGAACAGAAGAACGAGGCAAGTATGCTGTTTAAGAAGCTCTGTCTGAAGCTGGACGCTCTTTCTCATTTCCACTTCACTCCAAAACCTGTTATAGAGGACATATCTGTTCAAGCCAATGTCCCTGCTTTGGCAATGGAAGAAATTGCACCTATGGCTGTTTCAGATGCAGCTATGCTGGCTCCTGAGGAGGTCTTTTCTGGAAAGGGTGATATCAAGGAAGAAGTAGAACTTACaaaggaagagagaaaaagGAGGAGagcaaataagaaaagaaaatttaaagAACGGAGGAGTCAGACTTCTCGGCAGTTTCCATCGTTGGAGGAGCTGCAAAATCAACGAAACTTGGAGGAAATGCAAATGAACTTCTACAACCTGTTTGGCTGTCGAGAAATTCGGGAAGAAAACAAGAATCTAGAATCTCTTCAAACTGTGATGTGA 1623 0.4171 MRCFKLLPFSKKSPLDQLLVDGFDAEQIWQQIDLQSQPLLPSLRRRVNRLQKNPEEISKLREALQGEKKAEGKTREEWNDESDGFDEELDEYDEEESAAEDKKEGEIRKEAESEDDEEEEDEDDEEEEEDEEGVEREESKSEEENEEADGGGIEDKFLKIKDLAKYLQEEEDNLENDVAGKLNDDEEGSEDDDESDEAGEFGLGDDEDGDEDAEDLENARYEDFFGAKKEKGSKRKGRLIHGSEDSDDGDMKFDRQKQETISTHEKQMEKIQSKIEQMENANLEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIQKRILEGRFDDVQRAPKLPLKAPREVKELDENKSKKGLADIYEEEYVQKTDPASAPLSFKDEQKNEASMLFKKLCLKLDALSHFHFTPKPVIEDISVQANVPALAMEEIAPMAVSDAAMLAPEEVFSGKGDIKEEVELTKEERKRRRANKKRKFKERRSQTSRQFPSLEELQNQRNLEEMQMNFYNLFGCREIREENKNLESLQTVM 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0776 540 MobiDBLite consensus disorder prediction 237 270 - -
Sto12g0776 540 Coils Coil 75 131 - -
Sto12g0776 540 MobiDBLite consensus disorder prediction 81 100 - -
Sto12g0776 540 PIRSF snoRNP_Mpp10 175 519 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Sto12g0776 540 PIRSF snoRNP_Mpp10 2 261 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Sto12g0776 540 Coils Coil 261 284 - -
Sto12g0776 540 MobiDBLite consensus disorder prediction 184 218 - -
Sto12g0776 540 MobiDBLite consensus disorder prediction 54 80 - -
Sto12g0776 540 MobiDBLite consensus disorder prediction 472 500 - -
Sto12g0776 540 Pfam Mpp10 protein 11 236 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Sto12g0776 540 Pfam Mpp10 protein 247 493 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Sto12g0776 540 MobiDBLite consensus disorder prediction 111 150 - -
Sto12g0776 540 Coils Coil 466 491 - -
Sto12g0776 540 MobiDBLite consensus disorder prediction 170 270 - -
Sto12g0776 540 MobiDBLite consensus disorder prediction 54 157 - -
Sto12g0776 540 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 10 507 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0776 K14559 - gmx:100781093 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0776 12 4861077 4872601 Sto12g0776 12 4861077 4872601 ECH