Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0772 ATGCCTCAACCCTCTGCTCCTCTACAGTGGACCTTCTCTCAGATTTTAGGCCAACCCACTCCCTCCGATCACCTTCAAGACGATGATACAATAACATCAATTGAGTTTGAGAAGCGTGGCGATTATCTTGCTATTGGAGATCGAGGTGGACGTGTTGTGATATTTGAAAGAGATGATAGAAACAATACTTCAAATCAACAACATTCTCGGAAAGTTTTGGAGCAGCTGGATTCCGCTCCTGCACGGCATCCCAAATTTCGGTTTAAGTCAGAATTCCAAAGTCATGAGCCAGAATTTGATTACTTGAAGAGTTTGGAAATTGAACAGAGGATTAAGAAAGTAAGATGGTGTCATACACAGAACGGGTTGCTCTTTATTCTTTCAGCAAATGATAAAACCATAAAGTTGTGGAAGATTAAGGAACATAAAGCGAAAAAAGTTAAAGAAGTGGCTCATCTTCCATTTGTAAGCTCAGAAAACATCTTTTTGGCTGAGAGGAGTTTCATGAGCGGGCAAGAAACCCTGTCTTCTGCTAATGGATATCATTTGGAATGGACAGAGAGCATAACTCAGAGTATGTCATTATCTCAAGACATTAATACTAAGATTGCAGGTATAGACAGCACTCTTCATAAGAAATGCCAAAAGGTGTATGCTCATGCTCACAGTTTTAACATCAACTCCATCTCAAATAATAGTGATTGTGAGACATTTATCTCAGCTGATGACCTTAGAATCAATTTGTGGAATTTTGAGGCCAGTGATCAGTGTTTCAATATCATTGACATGAAGCCTTCAAATATGGAGGATCTTACCGAGGTCATAACATCAGCTGAATTCCATCCATTACATTGCAACCTGCTAGCATACAGCAGTTCACGAGGTTTTATTCGTCTGTCTGACTTGAGACAAGCAGCGATATGTGATCACAGTGCTAGAATATTTCATGATGGAGCATCCAATGGGATGAAATCATTTTTTGAGGAGATCATTGCAAGCATCTCTGACATAAAGTTTTTGAATGATGGGCAGCATCTTATAAGCCGTGATTTCATGAATATGAAGCTTTGGGACATGCGTATGGATTCTTCTCCAATTGCAGTATTTAAAATTCATGAGCACCTGCGCCCTAGGCTACATGAGTTATACAATGATGACTAcatatttgataaatttgatAGCTGCTTTAGTGGAGATGGACTTCATTTTGCCACTGGATCATATAGTAATCTCTTGAGGACATTCTCCCTTGGGTCTGGAACTGAGGAAGGGATCAAACTAGACGTTACAGGAAATTTAGACAGTAGTAAGAAGCCTCTTCACCAGGCTGCTCCAAAGGTTAGAAGGTCGTCCCTGAGCAACCTAACACGTGGATTTTACCAacatgGTCATGACAGTGAGGAAATATCTTGTAACTTCAAATCCAGACTGTTACATGTGGCTTGGCATCCAACATCCAATATAGTTGCCTGTGCTGCTGAAGGTAGCTTGCTATTGTACAATGCCtag 1509 0.3989 MPQPSAPLQWTFSQILGQPTPSDHLQDDDTITSIEFEKRGDYLAIGDRGGRVVIFERDDRNNTSNQQHSRKVLEQLDSAPARHPKFRFKSEFQSHEPEFDYLKSLEIEQRIKKVRWCHTQNGLLFILSANDKTIKLWKIKEHKAKKVKEVAHLPFVSSENIFLAERSFMSGQETLSSANGYHLEWTESITQSMSLSQDINTKIAGIDSTLHKKCQKVYAHAHSFNINSISNNSDCETFISADDLRINLWNFEASDQCFNIIDMKPSNMEDLTEVITSAEFHPLHCNLLAYSSSRGFIRLSDLRQAAICDHSARIFHDGASNGMKSFFEEIIASISDIKFLNDGQHLISRDFMNMKLWDMRMDSSPIAVFKIHEHLRPRLHELYNDDYIFDKFDSCFSGDGLHFATGSYSNLLRTFSLGSGTEEGIKLDVTGNLDSSKKPLHQAAPKVRRSSLSNLTRGFYQHGHDSEEISCNFKSRLLHVAWHPTSNIVACAAEGSLLLYNA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 35 55 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 114 142 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 222 249 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 250 277 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 278 306 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 307 334 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 335 362 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 363 388 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 389 415 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 471 500 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 PANTHER OS02G0617600 PROTEIN 1 501 - -
Sto12g0772 502 SUPERFAMILY WD40 repeat-like 29 501 IPR036322 GO:0005515
Sto12g0772 502 PIRSF PPA2_B55 2 502 IPR000009 GO:0000159|GO:0019888
Sto12g0772 502 Pfam WD domain, G-beta repeat 213 250 IPR001680 GO:0005515
Sto12g0772 502 Gene3D - 60 318 IPR015943 GO:0005515
Sto12g0772 502 Gene3D - 323 502 IPR015943 GO:0005515
Sto12g0772 502 SMART WD40_4 320 358 IPR001680 GO:0005515
Sto12g0772 502 SMART WD40_4 18 56 IPR001680 GO:0005515
Sto12g0772 502 SMART WD40_4 464 501 IPR001680 GO:0005515
Sto12g0772 502 SMART WD40_4 211 250 IPR001680 GO:0005515
Sto12g0772 502 SMART WD40_4 98 138 IPR001680 GO:0005515
Sto12g0772 502 SMART WD40_4 254 301 IPR001680 GO:0005515
Sto12g0772 502 SMART WD40_4 362 416 IPR001680 GO:0005515
Sto12g0772 502 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 1 501 IPR000009 GO:0000159|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0772 Sto-Chr12 4832814 4836615 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0772 K04354 - gmx:100795137 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0772 12 4832814 4836615 Sto12g0772 12 4832814 4836615 ECH