Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0750 ATGGGAGAGAGTACAGTGGGTGGTGCTTCGCTGCCATCGGGTCCAGACGCAAAGAAGAGGAGGGTCACCTATTTCTATGAGCCCACCATCGGCGATTACTACTATGGCCAAGGCCACCCTATGAAACCCCATCGGATTCGCATGGCCCACAATCTCATCGTCCATTACTCCCTTCATCGCCGCATGGAAATCAATCGTCCCTTCCCCGCTGCCCCCGACGACATCCGCCGATTCCACACCGACGAATACGTCGACTTCCTCTCCACCGTCTCGCCGGAGACTCTCGGTGAGAACACATTCGCTCGCCAACTCAAGCGCTTCAATGTCGGCGAGGACTGTCCCGTCTTTGACGGCTTATTCAATTTTTGTCAAGCCTCTGCTGGTGGCTCCATTGGCGCCGCCGTCAAGTTGAACCGTGGGGATGCTGATATCGCAATTAATTGGGCTGGTGGCTTGCACCATGCCAAGAAGTCTGAGGCTTCTGGGTTTTGTTACGTCAATGATATTGTCCTCGGGATTCTTGAGCTTCTCAAGGTTCACAGGCGTGTGCTGTATGTTGACATTGATGTCCACCATGGGGATGGTGTTGAGGAGGCATTTTACACGACAGATAGAGTGATGACAGTTTCATTTCATAAGTTTGGGGATTTTTTCCCAGGCACTGGCCACATAAGAGATGTCGGGGCCGGCCCTGGGAAGCATTATGCTTTAAATGTCCCATTGAATGATGGGATGGATGATGAGAATTTCCGTGGTCTGTTCCGCCCCATCATTCAGAAAGTCATGGAGATTTATCAACCTGATGCAGTTGTTCTTCAATGTGGTGCTGATTCGCTGTCTGGTGACAGATTGGGTTGTTTCAATTTGTCTGTGAAGGGTCACGCAGATTGCCTTCGTTTCCTAAGATCTTTCAATGTTCCCTTAATGGTCTTGGGTGGGGGAGGATATACAATTCGGAATGTTGCTCGTTGCTGGTGTTATGAGACGGCGGTGGCAGTAGGAGTGGAACCTGATAATAAGTTGCCTTACAATGAATATTTTGAGTATTTTGGCCCAGATTACACGCTTCATGTTGATCCAGGCAACATGGAGAACCTAAATTCACCCAAGGATATGGAGAAAATAAGgATCACACTACTGGAACAGCTTTCCAGACTTCCTCATGCGCCCAGTGCACCTTTTCAGACAACACCATCCACCATTGAAGTTCCAGAAGAGGCTGAAGAGGACATGGATCGAAGACCAAAACGTCGCATATGGAGTGGTGAAGATTATGATTCCGATCATGATGAAGAAGAGAAGGCTAGTTCAAAGTGCTCAAATTTAACTGCCCATATGAGGTGA 1344 0.4881 MGESTVGGASLPSGPDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAAPDDIRRFHTDEYVDFLSTVSPETLGENTFARQLKRFNVGEDCPVFDGLFNFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAGPGKHYALNVPLNDGMDDENFRGLFRPIIQKVMEIYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPGNMENLNSPKDMEKIRITLLEQLSRLPHAPSAPFQTTPSTIEVPEEAEEDMDRRPKRRIWSGEDYDSDHDEEEKASSKCSNLTAHMR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0750 447 MobiDBLite consensus disorder prediction 388 447 - -
Sto12g0750 447 PRINTS Histone deacetylase superfamily signature 150 173 IPR000286 -
Sto12g0750 447 PRINTS Histone deacetylase superfamily signature 182 197 IPR000286 -
Sto12g0750 447 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Sto12g0750 447 PRINTS Histone deacetylase signature 41 58 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PRINTS Histone deacetylase signature 74 92 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PRINTS Histone deacetylase signature 107 124 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PRINTS Histone deacetylase signature 128 148 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PRINTS Histone deacetylase signature 169 185 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PRINTS Histone deacetylase signature 228 241 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PRINTS Histone deacetylase signature 245 263 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 PANTHER HISTONE DEACETYLASE 6 436 - -
Sto12g0750 447 SUPERFAMILY Arginase/deacetylase 20 385 IPR023696 -
Sto12g0750 447 PIRSF HDAC_I_euk 7 446 IPR003084 GO:0004407|GO:0016575
Sto12g0750 447 Gene3D Histone deacetylase domain 12 398 IPR037138 -
Sto12g0750 447 PANTHER HISTONE DEACETYLASE 6 436 - -
Sto12g0750 447 MobiDBLite consensus disorder prediction 407 438 - -
Sto12g0750 447 CDD HDAC_classI 25 332 - -
Sto12g0750 447 Pfam Histone deacetylase domain 39 330 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0750 Sto-Chr12 4691787 4694478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0750 K06067 - tcc:18603991 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0750 12 4691787 4694478 Sto12g0750 12 4691787 4694478 ECH