Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0714 atGAATTTGTTGACGGCGCTTGCGTATGGATGCAGCTACTGTAATGCTAATGCACGTCCTCTCCAACGCCAACACCATTCTCTCTTAACTTCCACTCTCCTTCACTTCCATCCTCAccgtccctctctctctctcttcacctCCTGCCCCATCATCACTACCCTCTCCTTCTCTCCCCttttcccaaaccctaatttccTCAACGCCAACACTCTCTTCTCTGCCATGGAGCAGCTTTGGTCTGGGAGTGATAGCAGCAAGAACAAGGCAATGGTGGAGAATTTGCGGAGTTATGGAATACTAACTTCAAAAAAGGTGGCTGAAGCAATGGAGACCATTGATAGAGCTTTCTTTGTACCCAAGGGAACCCAACCTTATGTTGACAGCCCCATGGCAATAGGCTACAATGCCACTATCTCTGCCCCTCATATGCATGCCACCTGCCTTGAGTTGCTGGAGGAGAATTTGCAGCCTGGAATGCGTGCTCTGGATGTTGGCTCTGGAACAGGGTATCTGACAGCATGCTTTGCTTATATGGTTGGACCCCAAGGCCGTGCTGTTGGTGTGGAGCATATTCCTGAATTGGTTTCCTCTTCGATAGAGAATATTGAGAAAAGTGCTGCAGCTCCTCTTTTGAAAGATGGATCACTCTCAGTGCATTGTGGTGATGGAAGGCAAGGTTGGGCGGAGTTTGCTCCTTATGATGCCATTCACGTGGGAGCTGCAGCACCAGAAATCCCAGAAGCTCTAATTGAGCAGTTGAAGCCTGGAGGCAGAATGGTGATTCCTGTTGGAAACATGTTTCAGGATTTACAAGTGGTGGATAAGAACTCTGACGGTTCTGTTAGTATCCGGACCGAGACTTCTGTTCGTTATGTGCCTCTCACAAGTCGAGATGATCAACTTAGAGGAGAGGCTACTGAATCCTGA 930 0.4602 MNLLTALAYGCSYCNANARPLQRQHHSLLTSTLLHFHPHRPSLSLFTSCPIITTLSFSPLFPNPNFLNANTLFSAMEQLWSGSDSSKNKAMVENLRSYGILTSKKVAEAMETIDRAFFVPKGTQPYVDSPMAIGYNATISAPHMHATCLELLEENLQPGMRALDVGSGTGYLTACFAYMVGPQGRAVGVEHIPELVSSSIENIEKSAAAPLLKDGSLSVHCGDGRQGWAEFAPYDAIHVGAAAPEIPEALIEQLKPGGRMVIPVGNMFQDLQVVDKNSDGSVSIRTETSVRYVPLTSRDDQLRGEATES 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0714 309 CDD AdoMet_MTases 161 264 - -
Sto12g0714 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 87 275 IPR029063 -
Sto12g0714 309 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 85 301 IPR000682 GO:0004719|GO:0036211
Sto12g0714 309 Gene3D Vaccinia Virus protein VP39 80 305 IPR029063 -
Sto12g0714 309 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 222 237 IPR000682 GO:0004719|GO:0036211
Sto12g0714 309 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 6 304 - -
Sto12g0714 309 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 87 298 - -
Sto12g0714 309 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 6 304 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0714 Sto-Chr12 4522720 4524848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0714 K00573 - tcc:18604997 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1318 3 9577434 9578779 Sto12g0714 12 4522720 4524848 CCT
Sto12g0714 12 4522720 4524848 Sto12g0714 12 4522720 4524848 ECH