Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0707 ATGGAAATGAAGAAGTTACTATGGGTTGTTCTGTCACTTGCATTAGTGCTAGTCAAGGTGGAGAGCTTGGATGTGAATGAGAAGGATTTAGAATCGGAGGAGAGCTTGTGGGATCTGTACGAGAGATGGAGAAGCCACCACACGGTTTCTCGAAGcctggaggagaagaagaagcgaTTCAACGTGTTCAAAGCCAATGCAGTTCATATCCACAACACAAACAAGCTGGACAGGCCGTACAAGCTGAAGCTGAACAAGTTCGCAGACTTGACCAACCACGAATTCAGGACTGCCTACGCCTCGTCAAAGGTTAACCACCACAGGATGTTCCGAGGTGCACCACACGCCAATGGAAGCTTCTCGTACGAGCATATCGTGGCTGCTAAACTCCCTGCCTCTATTGATTGGAGGAAGAAAGGTGCTGTCACTCCAGTCAAGAATCAAGGCCAATGcgGTAGTTGCTGGGCGTTTTCAACGGTGGCAGCAGTAGAAGGGATAAACAAGATCAAGACAGGAAAGCTAGTGTCGTTGTCAGAGCAAGAGTTGGTTGACTGTGATACTGGAGGGCAGAACGCAGGATGCAATGGTGGGCTGATGGAGTATGCTTTTGAGTTCATCAAGCAGAATGGTGGCCTTACAACAGAGGACAACTACCCTTACACTGCCGAAGCTGGAGAGTGCCAGCAGCAGAATGAGATGGCAGTCACCATTGATGGACACGGGAATGTTCCAGCCAACAGTGAGGAAGCTTTGCGCAAAGCCGTAGCCAACCAACCTGTGTCTGTCGCCATTGATGCTGGGAGTCACGATTTCCAGTTCTACTCTGAGGGAGTGTTTACGGGAGAATGTAGCACAGAGTTGAACCATGGGGTGGCTGCTGTGGGGTATGGAACGACCACTGATGGAACCAAATACTGGATAGTGAAGAACTCGTGGGGAGCTGAATGGGGAGAGAGTGGTTTCGTGAGGATTGAGAGGGGAATTTCTGAGGAAGGAGGACGCTGTGGCATAGCGATGGAGGCTTCCTACCCTATCAAGAACTCCTCCACTAACCACAAACAACAATCCACTGATCTTAAAGATGAGCTCTGA 1092 0.4853 MEMKKLLWVVLSLALVLVKVESLDVNEKDLESEESLWDLYERWRSHHTVSRSLEEKKKRFNVFKANAVHIHNTNKLDRPYKLKLNKFADLTNHEFRTAYASSKVNHHRMFRGAPHANGSFSYEHIVAAKLPASIDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINKIKTGKLVSLSEQELVDCDTGGQNAGCNGGLMEYAFEFIKQNGGLTTEDNYPYTAEAGECQQQNEMAVTIDGHGNVPANSEEALRKAVANQPVSVAIDAGSHDFQFYSEGVFTGECSTELNHGVAAVGYGTTTDGTKYWIVKNSWGAEWGESGFVRIERGISEEGGRCGIAMEASYPIKNSSTNHKQQSTDLKDEL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0707 363 SMART Inhibitor_I29_2 40 95 IPR013201 -
Sto12g0707 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 148 159 IPR000169 -
Sto12g0707 363 SUPERFAMILY Cysteine proteinases 33 345 IPR038765 -
Sto12g0707 363 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 20 352 - -
Sto12g0707 363 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Sto12g0707 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 287 297 IPR025660 -
Sto12g0707 363 Gene3D Cysteine proteinases 13 347 - -
Sto12g0707 363 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 352 - -
Sto12g0707 363 PRINTS Papain cysteine protease (C1) family signature 148 163 IPR000668 GO:0006508|GO:0008234
Sto12g0707 363 PRINTS Papain cysteine protease (C1) family signature 289 299 IPR000668 GO:0006508|GO:0008234
Sto12g0707 363 PRINTS Papain cysteine protease (C1) family signature 305 311 IPR000668 GO:0006508|GO:0008234
Sto12g0707 363 Pfam Papain family cysteine protease 130 345 IPR000668 GO:0006508|GO:0008234
Sto12g0707 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 305 324 IPR025661 -
Sto12g0707 363 SMART pept_c1 130 345 IPR000668 GO:0006508|GO:0008234
Sto12g0707 363 CDD Peptidase_C1A 131 344 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0707 Sto-Chr12 4481532 4482802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0707 K16292 - zju:107418255 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1314 3 9558121 9559573 Sto12g0707 12 4481532 4482802 CCT
Sto12g0707 12 4481532 4482802 Sto12g0707 12 4481532 4482802 ECH