Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0700 ATGGCTTCTAAAATCATTCTCGTCACTATCTGCATACTCTCCTCCATTCTCTCAACTGTGGAGTCCCAAACAAGAGGCTTCAAGAAGATTTATGCCTTTGGTGATTCCTTCACTGACACTGGCAACACAAAGAATGCCAATGGCCCAAGTGGGTTTGGCCACGTGTCCAACTCTCCCTATGGAACTTCCTTCTTCAACCATTCCACCAACAGATACTCTGATGGAAGGCTTGTCATAGATTTTGTGGCAGAAGCTTTGTCTTTGCCTTACTTGCCCCCTTACCTACACTGCAAAGGCAACGATACTTTCGGAGTTAACTTTGCTGTGGCTGGTTCTACTGCAATAAACCACGAGTTCTTTGTCAGGAACAACCTTACACTTGATGCAACCCCTCAGTCTATCCAAACCCAGCTTCTATGGTTCAACAAATACCTTGAGAACCAAGGATCGTGTAAGGGAGAACCATCATCAGCGTGTAAAGCTGACTTTGAGGATGCCCTGTTTTGGTTTGGTGAGATTGGAGTCAATGATTATGCTTACACTCTTGGATCTTCAGTCTCCCGAGACACCATTAGAAAGCTCTCTATGTACAGTGTCTCCGATGCCTTACagGCATTGCTAGAGAAGGGTGCCAAGTACCTAGTTGTGCAGGGTTTTCCCCTAACAGGGTGCCTATCCTTGGCCATGTATCTGGCTCCTGAAAACGACAGAGACGACATGGGATGCGTGAAAAGCGAAAACAACCTTAGCTACACACACAACCTCGTACTGCAAGCCAAGTTGCAACAACTCAGGGAACAGTACCCTCATGCTGTCATAATCTATGCTGATTACTGGAATGCCTACAGGACAGTGATGAAGAACCCAGCTAGATATGGATTCACAGAGAGGTTCTCAGTGTGCTGTGGATCAGGAGAACCACCTTACAACTTCAGTGTGTTTGCCACTTGTGGGACACCTAATGCCACCGTCTGCTCAAGCCCTACTCACTATATCAATTGGGATGGTGTTCATTTGACGGAAGCTCTGTATAAGGTTGTTTCTGATATGTTTCTACGAGGAAACTATAGTCAACCTCCATTTAGTTTTTTGTTGGACAAGAAAGTGAGGCAGGGGTGA 1119 0.4576 MASKIILVTICILSSILSTVESQTRGFKKIYAFGDSFTDTGNTKNANGPSGFGHVSNSPYGTSFFNHSTNRYSDGRLVIDFVAEALSLPYLPPYLHCKGNDTFGVNFAVAGSTAINHEFFVRNNLTLDATPQSIQTQLLWFNKYLENQGSCKGEPSSACKADFEDALFWFGEIGVNDYAYTLGSSVSRDTIRKLSMYSVSDALQALLEKGAKYLVVQGFPLTGCLSLAMYLAPENDRDDMGCVKSENNLSYTHNLVLQAKLQQLREQYPHAVIIYADYWNAYRTVMKNPARYGFTERFSVCCGSGEPPYNFSVFATCGTPNATVCSSPTHYINWDGVHLTEALYKVVSDMFLRGNYSQPPFSFLLDKKVRQG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0700 372 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 5 369 - -
Sto12g0700 372 SUPERFAMILY SGNH hydrolase 28 352 - -
Sto12g0700 372 CDD SGNH_plant_lipase_like 30 355 IPR035669 -
Sto12g0700 372 Pfam GDSL-like Lipase/Acylhydrolase 30 349 IPR001087 GO:0016788
Sto12g0700 372 Gene3D SGNH hydrolase 18 354 IPR036514 -
Sto12g0700 372 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 5 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0700 Sto-Chr12 4440353 4442081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0700 19 356 Acyl Lipid Metabolism Gene Families AT4G10950 26.420 7.86e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0700 - - gmx:100810163 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0700 12 4440353 4442081 Sto12g0700 12 4440353 4442081 ECH