Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0699 ATGTTAGAATACTATCAACTGCTTGATGAAAGGCCCTCTTTCCAAGATTCCCTCAAGGCACTTGAGGCTGATATTCAGCATGCCAATATGCTGGCAGCTTCTATTCCAAGGGGCAAGGGTAGGCCTCGTCTTCAAATGAAGTTAGTTTACAATCAGTTGGCGCCCATCTTCCTGTATTTACTCCAATGGATAGATTGCTCCTGTTCATGTCTATTTTCAAGCTATTTGAATCTTTTCCATGTAATTGTGTACAAGCTGCACTCAAATGGGAAACCAAAAATATCTTCTTGTGGAAGGAAAGCAAGCATAAGGGAATTCTACAGTGTTATATTGCCTTCACTTCAGCGCCTTCATGGTGATTCAACTGAAACTGATATTACTCAAGAAAAAGGTAGAAACATCCCGATGGCTGTGAATAGGACCATTGAAGATAAGAGAAATACTTCTGATGTAGACAAGGAAAGAGAAAACGAGTGTGGCATCTGCTTAGAGCATTGCACCAAAATGGTTTTGCCAAACTGTTGCCACGCCATGTGTATAAATTGCTACCATGACTGGAACACAAGATCAGAATCTTGTCCATTTTGCAGAGGAAGTTTGAAAAGAGTCAAGTCAGGTGATTTGTGGGTTCTAACATGCACAAGTGATATGATTGATGTGCAAACTGTTGTTAGAGAAGACATGCTTCGTCTCTCACTCTTTATAAACAACCTCCCTAAGGATATTCCAGATGCTCTCTTCTCAATGTATAATGAGTACTTGTTTTAA 768 0.3997 MLEYYQLLDERPSFQDSLKALEADIQHANMLAASIPRGKGRPRLQMKLVYNQLAPIFLYLLQWIDCSCSCLFSSYLNLFHVIVYKLHSNGKPKISSCGRKASIREFYSVILPSLQRLHGDSTETDITQEKGRNIPMAVNRTIEDKRNTSDVDKERENECGICLEHCTKMVLPNCCHAMCINCYHDWNTRSESCPFCRGSLKRVKSGDLWVLTCTSDMIDVQTVVREDMLRLSLFINNLPKDIPDALFSMYNEYLF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0699 255 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Sto12g0699 255 SUPERFAMILY RING/U-box 149 202 - -
Sto12g0699 255 PANTHER RING FINGER PROTEIN 41, 151 9 255 - -
Sto12g0699 255 PANTHER OS01G0905700 PROTEIN 9 255 - -
Sto12g0699 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 207 IPR013083 -
Sto12g0699 255 Pfam Zinc finger, C3HC4 type (RING finger) 156 202 - -
Sto12g0699 255 SMART ring_2 159 196 IPR001841 -
Sto12g0699 255 ProSitePatterns Zinc finger RING-type signature. 174 183 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0699 Sto-Chr12 4437659 4439352 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0699 - - jre:109018365 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0699 12 4437659 4439352 Sto12g0699 12 4437659 4439352 ECH