Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0687 ATGCAGCAGGCACTTCCTTACCGGTCATGGCACCACCACCACGCCCACTTAAACCCCATCTCCCACAATCTCAACATCAATACCGATCCATCCACATCATCCTCTGTTCCTTCTTCGGTTCTGGCAAGAGGAAGCACGGAGGGAATGGTACGGAACATGGTGTCGGAGAACGCGGCGATAGTGTTCGGGCGGCGAGGGTGCTGCATGAGCCACGTGGTGAAGCGCTTGCTTCTGGGTCTGGGGGTGAATCCTGCGGTGTATGAGATcgaggaggaagacgaagagGGTGTTGTTAGAGAGCTGGAGGCCATTGGTGATGGTGAGAAACAGGGGAAGCTGCAGCTTCCGGCGGTGTTCATCGGCGGCAAATTTTTCGGAGGATTGGATCGGCTTATGGCTACTCATATTTCCGGTGAATTGGTTCCGATTCTGAAGAAAGCAGGGGCTTTGTGGCTCTga 459 0.5207 MQQALPYRSWHHHHAHLNPISHNLNINTDPSTSSSVPSSVLARGSTEGMVRNMVSENAAIVFGRRGCCMSHVVKRLLLGLGVNPAVYEIEEEDEEGVVRELEAIGDGEKQGKLQLPAVFIGGKFFGGLDRLMATHISGELVPILKKAGALWL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0687 152 PANTHER GLUTAREDOXIN-C9 25 152 - -
Sto12g0687 152 Pfam Glutaredoxin 60 124 IPR002109 -
Sto12g0687 152 PANTHER GLUTAREDOXIN 25 152 IPR011905 -
Sto12g0687 152 ProSiteProfiles Glutaredoxin domain profile. 47 151 - -
Sto12g0687 152 TIGRFAM GlrX-like_plant: glutaredoxin-like family 50 152 IPR011905 -
Sto12g0687 152 Gene3D Glutaredoxin 43 151 - -
Sto12g0687 152 SUPERFAMILY Thioredoxin-like 48 151 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0687 Sto-Chr12 4376215 4376673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0687 50 152 Miscellaneous Gene Families AT4G15690 42.718 5.36e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0687 - - qsu:112015375 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0494 7 3638630 3638935 Sto12g0687 12 4376215 4376673 CCT
Sto12g0687 12 4376215 4376673 Sto12g0687 12 4376215 4376673 ECH