Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0651 ATGGAGCTCACTATTACACAACCTGATGATTGGCATCTGCACCTTCGTGATGGTGACCTTCTCAAAGCTGTCATCTTCGACAGTGCAAAACATTTTGGAAGGGCAATTGTGATGCCAAATTTGAGGCCACCCATTACTACAACAGCTGCTGCCGTGGATTATCGAGAGTCCATCTTGAAAGCACTGCCTACAGATAGCAACTTCACTCCACTGATGACCATTTATCTAACAGACATGACGAGCCCAAATGAGATTAAACTTGCAAAAAGAAGCGGGGTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACTACAAACTCTCAAGATGGTGTTACGGATCTACTTGGAAAATGTTTTCCTGTTCTGGAGGAGATGGCTGAGGAGAATATCCCGTTATTGGTTCATGGAGAAGTTACAGATCCAAGTGTTGATATTTTTGATAGGGAGAAGGTCTTTATTGAAACAACTTTAGAGCCTTTAGTTCAAAGGCTTCCACAGCTGAAGGTTGTAATGGAACATATCACTACCGTGGACGCGGTTAAATTTGTAGAGTCTTGTAAGGAAGGTTCTGTAGCAGCAACTGTTACACCACAACATCTTCTTCTCAACCGCAATTCTTTGTTCCAAGGTGGCTTGCAGCCTCACAATTACTGTCTTCCGGTTCTTAAAAGAGAAATACACAGAAAGGCTATTGTTTCTGCTGTTACGAGTGGAAGCAAAAGATTTTTCCTTGGGACTGATAGTGCTCCGCATGAGAGACGTAAAAAAGAATGCCCTTGCGGATGTGCTGGCATATATAATTCCCCTGTTGCTCTATCACTATATGCCAAGGTCTTTGAAGAGGCTGGCGCACTCGACAAACTGGAGGCCTTCGCAAGCTTTAATGGACCAGACTTCTATGGCCTCCCAAGAAACAACTCAAAGATTAAACTGAGAAAGGCTCCGTGGAGGGTACCTGAGTCTTTGTCGTTTCCTTTCGGAGACATTGTTCCCATGTTTGCTGGTGAAACGCTTGAATGGGAGCCAATCCCTATTTGA 1041 0.44 MELTITQPDDWHLHLRDGDLLKAVIFDSAKHFGRAIVMPNLRPPITTTAAAVDYRESILKALPTDSNFTPLMTIYLTDMTSPNEIKLAKRSGVVYGVKLYPAGATTNSQDGVTDLLGKCFPVLEEMAEENIPLLVHGEVTDPSVDIFDREKVFIETTLEPLVQRLPQLKVVMEHITTVDAVKFVESCKEGSVAATVTPQHLLLNRNSLFQGGLQPHNYCLPVLKREIHRKAIVSAVTSGSKRFFLGTDSAPHERRKKECPCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFASFNGPDFYGLPRNNSKIKLRKAPWRVPESLSFPFGDIVPMFAGETLEWEPIPI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0651 346 PIRSF Dihydroorotase 1 344 IPR004721 GO:0004151|GO:0019856
Sto12g0651 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Sto12g0651 346 PANTHER DIHYDROOROTASE 1 343 IPR004721 GO:0004151|GO:0019856
Sto12g0651 346 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
Sto12g0651 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Sto12g0651 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Sto12g0651 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Sto12g0651 346 Pfam Amidohydrolase family 10 316 IPR006680 GO:0016787
Sto12g0651 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Sto12g0651 346 Gene3D - 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0651 Sto-Chr12 4126401 4129216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0651 K01465 - gmx:100815210 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0651 12 4126401 4129216 Sto12g0651 12 4126401 4129216 ECH