Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0641 ATGCTCTTCTCTGAGAGATCTAGGTACCCACATCAGAGCCAAAAGGGTGGCTGGGAATCTCATAAATTTCGCTGGTTTTCGCCGTCCGGTATATACAGAAGCATGGTGGCAGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGCTTCCTGTGTGCTTTTCATATACATGTCTTTTGGAGACTTGAGGGCCTTGGATTATGTCATAGCAGAAGCGAGGCGTCATAGAATTCGGCTGCTCCTTACCTTAGTTAATAATTTGCATGCCTACGGTGGGAAGACTCAATACGTCAAATGGGCATGGGAAGAAGGGATTGGGTTAAGCTCATCCAATgattctttcttctatgatccATCAATCCGTAGTTATTTCAAGAACTACATCAAGACTGTTCTGACAAGGAAGAATACTATCACTGGAATTGAATATAGATATGACCCTGCCATATTTGGTTGGGAATTAATTAATGAACCTCGTTGCATGACTGATCCCTCAGGCGACACTCTCCAAGACTGGATAGAAGAAATGTCAGCTTTTGtcaaattgattgacaagaacCATTTGGTGACAGTTGGCCTTGAAGGATTTTATGGTCCTAATGACCCAAAAAGATCAACTGTCAACCCAGAGGAGTGGGCATCCAGACTTGGATCTGATTTTATTCGCAATTCCAGAATTGCAAATATCGATTTCACCTCTGTTCACATCTATCCCGACCATTGGCTTCATAAGCCAGATTTTGAAGACAACCTGAAATTTGTCTCAAAGTGGATGCTTTCTCACATTGAAGATGGTGACAAAGTTTTGAAGAAGCCAGTTTTGTTCTCTGAATATGGGTGGTCAGACTTGACTAAGAACTTCTCACCATCTGACCGTGAAAAGATGTATAGAACAATTTTAGACGTAATCTACAAATCTGCTAAGAAAAACAGGTCTGGGGCAGGTGCTTTAGTGTGGCAATTCATAGTGGAAGGATTGAACGAGCATCATGATGATTTTGGGATGGTCCCATGGGCAAGGTCATCAACTTATTCACTATTTGTTCAACAATCATGCAGATTGGCCAAAGTTACAGGATTGACTCAACGGGACAGAAGTTTCAGAGTTTCAGATACACCACTTCTCTCATTCTCCGAAGCCACCCTATCAAAATCGTCTTCAAGCTTCTTCACCAGCCTTCTCCGAGCCCTACGATCCCCAATTTCGATTCCCTCACCATCTTCCACATCGTCATCACTCAAAGCCATGTATCTCCGTCGCTTGTTGGTAACCGGTGCCGGAGGCGGTGAAACCAAAGCTACCTTTTTACTCCCAGCGATAATTTCACCATCCAATTTACTGAAACACGAACGAACCTCCGAAACCGGACTTGGGTTCTTGATATTGAAGAGCGTCTCACGGTCGGCAGGAAGGTTGTTGACGTCGAAGCGGAGGCCACCCGTGGACCAGTGGGCTTCGTTGACCCACGACATCAATGGATCGGAGAGGGTCACCGGCGGGTGA 1503 0.4365 MLFSERSRYPHQSQKGGWESHKFRWFSPSGIYRSMVAGNGLFYPILGFASCVLFIYMSFGDLRALDYVIAEARRHRIRLLLTLVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYIKTVLTRKNTITGIEYRYDPAIFGWELINEPRCMTDPSGDTLQDWIEEMSAFVKLIDKNHLVTVGLEGFYGPNDPKRSTVNPEEWASRLGSDFIRNSRIANIDFTSVHIYPDHWLHKPDFEDNLKFVSKWMLSHIEDGDKVLKKPVLFSEYGWSDLTKNFSPSDREKMYRTILDVIYKSAKKNRSGAGALVWQFIVEGLNEHHDDFGMVPWARSSTYSLFVQQSCRLAKVTGLTQRDRSFRVSDTPLLSFSEATLSKSSSSFFTSLLRALRSPISIPSPSSTSSSLKAMYLRRLLVTGAGGGETKATFLLPAIISPSNLLKHERTSETGLGFLILKSVSRSAGRLLTSKRRPPVDQWASLTHDINGSERVTGG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0641 500 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 38 63 - -
Sto12g0641 500 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 63 368 - -
Sto12g0641 500 PANTHER - 63 368 IPR045053 GO:0004553
Sto12g0641 500 PANTHER - 38 63 IPR045053 GO:0004553
Sto12g0641 500 Pfam Cellulase (glycosyl hydrolase family 5) 108 320 IPR001547 GO:0004553|GO:0071704
Sto12g0641 500 Gene3D Glycosidases 2 358 - -
Sto12g0641 500 SUPERFAMILY (Trans)glycosidases 60 350 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0641 Sto-Chr12 4052669 4057981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0641 62 365 Glycoside Hydrolase AT2G20680 69.737 2.99e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0641 K19355 - gmx:100811461 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0641 12 4052669 4057981 Sto12g0641 12 4052669 4057981 ECH