Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0612 ATGGAAGCACTTGTGAATGGGAGCCATGGGTATGACATCATTAGTTGGTTCGAAGATGTAACCAAGAACGCTGCCTCTGTTCAGACCCAGACGCTATCCCAGATTCTGAAGCTCAACTGTGGAACAGAATATCTCAAGAAATGGCTTGGAGATGACTACAATATCCAAGACATGGATGACTGTGCATTGGAATCCCTTTTTAGTCGTGTGGTTCCTCTTGCATCACATGCAGATTTTGAGCCCCTTATCCAAAGAATCGCAGATGGGGACACTGCCCCTTTACTCACTCAACAACCCATTACCACTCTTTCCTTAAGTTCGGGAACCACAGACGGAAGGCAAAAGTTCGTACCTTTCACCCGTCATAGCGCCCAAACTACCCTTCAAATTTTCACTTTAGCAGCAGCTTACAGATCAAAGGTTTATCCCACAAGAGAAGGAGGGAGAATTCTGGAGTTCATATACAGCAGCAAACAGTTCAAAACGAAAGGAGGCTTAACAGCAGGAACAGCCACCACACACTACTACGGGAGCCAAGAGTTCAAGATCAAACAGGAGAAAACGAAGTCGTTTACTTGCAGTCCAGACGAAGTCATCTCAGGAGGAGACTACAAGCAAGTCACCTACTGCCATCTTCTGCTTGGTCTCTTCTTCTCTGACCAAGTAGAGTTCATAACCTCAGCCTTTATCTACAGCATAGTCCAAGCCTTTTGCAACTTCGAAGAGCTGTGGAGAGAAATCTGTTTGGACATAAAAAATGGGACTCTGAGTTCGAGAATCAAAATACCCAGAATGAGGAATTCTGTTCTGGAGATTCTCTATCCAAACCCATCCCTGGCTTCAAAATTGGAAACCAAGTGCCAAGAATTAGAAGGAGTGAATTGGTTAGGTTTGATCCCTAAGCTGTGGCCTAATGCTAAGTACGTGTATTCCATAATGACAGGTTCCATGGAGCCATACTTGAAGAAGTTAAGGCATTATGCGAATGGGTTGGCATTAGTGAGTGCTGATTATGGATCCACAGAGAGCTGGATAGGGGTTAATGTGGATCCTGGTTTGCCTCCTGAGAATGTCACATTTGCCGTAGTCCCTACTTTCTCTTACTTTGAGTTCATTCCGCTTTATAAGTTACAGCAACATTGCACTTCTGTTGCTACTGATGATTTCATGGAGGATAAGCCAATCCCTCTGTCTCAGGTTCAAGTTGGACAGAAGTATGAAATAGTCCTCACTACTTTCACTGGGCTGTACAGGTACAGATTAGGGGACGTAGTGGAAGTAGGAGGATTCCACAACAAGACTCCGAAGCTGAACTTCATATGCAGAAGGAAGCTAATCCTAACAGTGAACATAGACAAGAACACAGAGAAGGACCTACAGCTTGTGGTGGAGAGGGGGTCACAGCTTCTGAACGCAGCGGAATTGGTGGACTTCACAAGCTGCGCTGAGGTGGCAGAGGAGCCAGGTCACTATGTGATATACTGGGAAATCAAAGGGGAGGTGGAGGAGGAGGTTCTAGAAGAATGTTGCAGAGAGATGGACGAGGGTTTTAGGGACCATGGTTATGTGGTGTCCAGGAGAACCAACTCCATTGGGCCTCTTGAGCTTTGCTTGGTCCAAACCGGAACCTTCAAGAAGATTCTCGATTACTTCGTCGCTAATGGAGCTGCCTTGAGCCAATTCAAGACCCCTAGGTGCACCAATAACGCTGTACTACTTGCTATTCTTAACGCTTCCACCCTCAAGAGGGTTCGTAGCTCTGCTTATGCTTCCCAACACCTCCATCCATCCCTACCTCCCTAG 1803 0.4615 MEALVNGSHGYDIISWFEDVTKNAASVQTQTLSQILKLNCGTEYLKKWLGDDYNIQDMDDCALESLFSRVVPLASHADFEPLIQRIADGDTAPLLTQQPITTLSLSSGTTDGRQKFVPFTRHSAQTTLQIFTLAAAYRSKVYPTREGGRILEFIYSSKQFKTKGGLTAGTATTHYYGSQEFKIKQEKTKSFTCSPDEVISGGDYKQVTYCHLLLGLFFSDQVEFITSAFIYSIVQAFCNFEELWREICLDIKNGTLSSRIKIPRMRNSVLEILYPNPSLASKLETKCQELEGVNWLGLIPKLWPNAKYVYSIMTGSMEPYLKKLRHYANGLALVSADYGSTESWIGVNVDPGLPPENVTFAVVPTFSYFEFIPLYKLQQHCTSVATDDFMEDKPIPLSQVQVGQKYEIVLTTFTGLYRYRLGDVVEVGGFHNKTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSQLLNAAELVDFTSCAEVAEEPGHYVIYWEIKGEVEEEVLEECCREMDEGFRDHGYVVSRRTNSIGPLELCLVQTGTFKKILDYFVANGAALSQFKTPRCTNNAVLLAILNASTLKRVRSSAYASQHLHPSLPP 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0612 600 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 8 589 - -
Sto12g0612 600 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 8 589 IPR004993 -
Sto12g0612 600 Pfam GH3 auxin-responsive promoter 16 569 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0612 Sto-Chr12 3882838 3885747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0612 12 576 EF-hand Containing Proteins AT1G23160 35.284 1.78e-119 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0612 K14487 - gmx:100792358 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0570 7 4269080 4278741 Sto12g0612 12 3882838 3885747 CCT
Sto12g0612 12 3882838 3885747 Sto12g0612 12 3882838 3885747 ECH