Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0598 atgaGGCGAAGGGCGGCTGATTTTCGAAGGCCAGTAAGGAGGAGGGTTCCGGATGTGTTGTGGTGGGCATTGTTTAGCGTAGTggttcttctttttatttatgttcTCAGCAAAGGGAATCAGGTTGAGTCCAGACCCGCATTATCTAAGGTAAAAATATCTCTTCTTAGAAATTTCAGGCATGATAGGATTATGGAAGGGCTTAATATTACTGAAGAGATGTTAAGCGCTTACTCAGTGGCCAGGCAACTGAATGACCAGATATCCTTAGCAAAAGCTTTTGTTGTCATTGCAAAAGAAAGTAGCAATCTCCAATTTGCTTGGGAATTAAGTGCCCAGATCCGCAATTCAAAGATTCTTCTCTCGAAAGCTGCCACCAGGCGAGCCCCTTTAACAACCATGGAATCAGAACGCGCAATCCATGATATGGCATTGTTGCTATACCAGGCCCAACAGCTTCATTATGACAGTGCAACGATGATCATGAGACTGAAGGCCAAAATTCAAACTCTTGAAGAACAATCAAGTTCTGTATCTGAAAAGAGTTCCAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGCCTGTACTGCCTTGGTGTCCGGTTGACTACTGAATGGTTCAGAAACCTTAAATTGCAAAAGAAATTGAAGGATAAGAGGAAAGTAGAGATGAAGCTGAAAGACAACAATCTTTACCACTTCTGTGTGTTCTCTGATAACATTATTGCTACCTCAGTTGTGGTTAATTCAACTGCAATAAATTCTAAAAATCCACACATGGTTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCAATGAGGGCATGGTTTGCCATGAACGATTTCCGAGGCGTAACTGTTGAGGTTCAAAAGTTTGAAGACTTCAGTTGGTTAAATGCTTCATATGTTCCTGTTCTTAAGCAACTTCAAGATGCAAAGATACAAAACTACTACTTTTCTGGCAGCAACGATGATGGCAAGACGCCAATCAAATTTCGTAACCCCAAATATCTATCCATGCTAAACCACCTGAGGTTTTATATCCCAGAAGTTTTCCCTGCTCTGAAGAAGGTGGTGTTTCTCGATGACGATGTAGTGGTTCAGAAGGATCTCTCTCCCCTCTTTTCCATTGATTTGAATGGCCATGTCAATGGGGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATATCTGAATTACTCCCATCCTCTTATACGAACACATTTTGATCCTGATGCATGTGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAGGAATGTCACAGGCATCTACCATTACTGGCAAGAAAAGAACATTGACCGGACATTGTGGAAACTCGGTACCTTACCACCTGGACTGTTGACATTCTATGGATTCACCAAGCCGTTGGATCCGTTGTGGCATGTATTGGGATTCGGCTACACAACTGTTGATCCTCAGTTGGTAGAGAAGGGGGCTGTACTGCACTTCAATGGGAACGCCAAGCCATGGTTGAAGATTGTGATTGAGAAGTACAAGCCAATATGGGAAAAATATGTTGATTATTCTCATGCTCTTCTGCAACAATGCAACTTTCATTGA 1620 0.4117 MRRRAADFRRPVRRRVPDVLWWALFSVVVLLFIYVLSKGNQVESRPALSKVKISLLRNFRHDRIMEGLNITEEMLSAYSVARQLNDQISLAKAFVVIAKESSNLQFAWELSAQIRNSKILLSKAATRRAPLTTMESERAIHDMALLLYQAQQLHYDSATMIMRLKAKIQTLEEQSSSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFRNLKLQKKLKDKRKVEMKLKDNNLYHFCVFSDNIIATSVVVNSTAINSKNPHMVVFHLVTDEINYAAMRAWFAMNDFRGVTVEVQKFEDFSWLNASYVPVLKQLQDAKIQNYYFSGSNDDGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSPLFSIDLNGHVNGAVETCMETFHRYHKYLNYSHPLIRTHFDPDACGWAFGMNVFDLVEWRKRNVTGIYHYWQEKNIDRTLWKLGTLPPGLLTFYGFTKPLDPLWHVLGFGYTTVDPQLVEKGAVLHFNGNAKPWLKIVIEKYKPIWEKYVDYSHALLQQCNFH 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0598 539 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 539 IPR029993 GO:0047262
Sto12g0598 539 CDD GT8_like_1 234 527 - -
Sto12g0598 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 535 IPR029044 -
Sto12g0598 539 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 3 539 - -
Sto12g0598 539 Coils Coil 161 181 - -
Sto12g0598 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 234 537 IPR029044 -
Sto12g0598 539 Pfam Glycosyl transferase family 8 241 513 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0598 Sto-Chr12 3801142 3807640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0598 1 539 Glycosyltransferase AT2G20810 78.598 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0598 K13648 - gmx:100792018 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0584 7 4348552 4351541 Sto12g0598 12 3801142 3807640 CCT
Sto12g0598 12 3801142 3807640 Sto12g0598 12 3801142 3807640 ECH