Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0593 ATGGCAGTGGAAAGCCAAAAATTGGGGTCTGACGGGAAGGTTTGGAATCTCTGTAGAATGCCGTTTTGGCAAACGAACAAtacttcttcgtcttcttcttctgcatCGTCTATGCATTATGCGCATCATCAGCAAAATCCGACTCTTCAATCTGTTGATAGATCTACTCACCAGTCTTCCACCACGGTTTCTTCCATGGCCAAGTCTTTACTTCCTACAAGGCGGAGGCTACGTCTTGATCCTCCCAACAAGCTCTACTTCCCCTATGAACCTGGGAAGCAAGTTAAGAGCGCAATCGAAATTAAAAACACTAGCAAGTCTCATGTGGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCCCCTGGTGGCATACTTGCACCTGATGAAAGTATAATCGCTGCTGTATTTAAGTTCGTCGAGCCACCAGAGAACAATGAGAAACCAGTTGATCAAAAGTGCAAGGTTAAGTTTAAAATCATGAGCTTAAAAGTCAAAGGCGAAATGGACTATGTACCAGAACTGTTTGACGAACAAAGGGATCAAGTAGCAGTAGAGCAAATTCTGCGGGTTGTTTTTCTGGACCCGGAACGTCCTACCCCCGCCATGGATAAACTTAAACGGCAGCTGGCTGAGGCTGAGGCTGCATTGGAAGCGCGAAAAAAGCCTCCAGAGGAGACAGGTCCTCGGATAGTTGGGGAAGGACTTGTTATAGATGAATGGaaagaaagaagagaaaaataccTGGCCCGGCAGCAGGTTGAAGGGAAGTTAAATTCCTTGGTCACTGATCTGTTAAACGAGGTTTGA 822 0.4355 MAVESQKLGSDGKVWNLCRMPFWQTNNTSSSSSSASSMHYAHHQQNPTLQSVDRSTHQSSTTVSSMAKSLLPTRRRLRLDPPNKLYFPYEPGKQVKSAIEIKNTSKSHVAFKFQTTAPKSCYMRPPGGILAPDESIIAAVFKFVEPPENNEKPVDQKCKVKFKIMSLKVKGEMDYVPELFDEQRDQVAVEQILRVVFLDPERPTPAMDKLKRQLAEAEAALEARKKPPEETGPRIVGEGLVIDEWKERREKYLARQQVEGKLNSLVTDLLNEV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0593 273 Gene3D Immunoglobulins 72 202 IPR013783 -
Sto12g0593 273 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 32 260 IPR016763 GO:0005789
Sto12g0593 273 Pfam MSP (Major sperm protein) domain 77 187 IPR000535 -
Sto12g0593 273 MobiDBLite consensus disorder prediction 28 69 - -
Sto12g0593 273 ProSiteProfiles Major sperm protein (MSP) domain profile. 76 198 IPR000535 -
Sto12g0593 273 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 32 260 - -
Sto12g0593 273 SUPERFAMILY PapD-like 65 205 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0593 Sto-Chr12 3779171 3781553 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0593 - - gmx:100820576 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0594 7 4395591 4398092 Sto12g0593 12 3779171 3781553 CCT
Sto12g0593 12 3779171 3781553 Sto12g0593 12 3779171 3781553 ECH