Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0568 ATGGTGGACGACAGAATTCCAAAGCGTCTTGAGGGAAAAGGTAGTACAATGCTGATTTGCTGGGTCCTTGGGAATGGATGTCTATTTTCATGGAACAGCATGCTGACAATTGTAGATTACTACGTCTACTTGTTTCCGAAGTACCACTCATCGCGGGTGCTGACGCTGGTATATCAGCCATTCGCGCTTACAACACTGGCAATACTATCTTATTACGAGGCAGAAATGAATACTAGAAAACGCAACCTAATTGGATATTCCCTGTTTTTCTTAAGTTCTCTGGCGGTGTTAGTGTTGGATTTAGCGACGTCCGGTAAAGGAGGGCTGGGAGTTTTCATTGGCATATGTGCAATTAGTGGAGCCTTTGGAATTGCAGATGCCAGTGTGCAAGGTGGAATGGTGGGAGACCTTTCTTACATGCACCCAGACTTCATGCAGTCATTCTTTGCTGGTTTGGCAGCATCAGGTTTACTCACATCTGCTCTCAGACTCATTACCAAAGCAGCTTTTGAGAATTCCAAGGATGGTCTCCGAAAAGGAGCCACATCAGAAGGATCCAAAACAGTTTCAGATGATCTTGCAGCCGGAGGCATTGAGGCATCACCTGCACATGTGGATCAATTTGGAAAACAACTAGAAAGGAAGGGAAACAAACAATTGCTAATGGAAAACATAGATTATGCACTTGATATCTTCCTCATATACGTCCTAACACTCTCTATTTTTCCTGGCTTCTTGTCCGAAGATACTGGATCACACAGTTTGGGCgcctgGTATGCCCTTGTGCTGATTGCAATGTACAACGTTTGGGATCTGATAGGAAGATACATTCCACTAATAAAATTGCTCAAGTTGGAGTCCAGGAAGTTGCTCATGATATCATGTATTGCTCGTTTAGCGCTGGTGCCAGCATTTTATTTTACTGCAAAGTATGGCGACCAAGGGTGGATGATATTCCTAACATCCTTCTTAGGCTTATCAAATGGTTACCTCACGGTGTGCGTTATAACGGCAGCACCAAAAGGTTACAAGGGGCCAGAACAAAATGCGTTGGGGAACTTGTTGGTGTTGTGTCTTATTGCAGGTCTATTTTCAGGAGTTGTGCTTGACTGGTTGTGGTTGATAGGTAAAGGCTGGCCATTCCCAGACGAGAATCTGAACCTCATGTTTGGAGTAGAGTGCAGTGCCCTTGGACAGCGCAAGCCAAAAACTAAAAATCACCGCATCCTAGTTTTCTGTTTAATTTATCGTAACCTTCATGCAGAAGCTGTGCGAATAGTTTtgtaa 1287 0.4367 MVDDRIPKRLEGKGSTMLICWVLGNGCLFSWNSMLTIVDYYVYLFPKYHSSRVLTLVYQPFALTTLAILSYYEAEMNTRKRNLIGYSLFFLSSLAVLVLDLATSGKGGLGVFIGICAISGAFGIADASVQGGMVGDLSYMHPDFMQSFFAGLAASGLLTSALRLITKAAFENSKDGLRKGATSEGSKTVSDDLAAGGIEASPAHVDQFGKQLERKGNKQLLMENIDYALDIFLIYVLTLSIFPGFLSEDTGSHSLGAWYALVLIAMYNVWDLIGRYIPLIKLLKLESRKLLMISCIARLALVPAFYFTAKYGDQGWMIFLTSFLGLSNGYLTVCVITAAPKGYKGPEQNALGNLLVLCLIAGLFSGVVLDWLWLIGKGWPFPDENLNLMFGVECSALGQRKPKTKNHRILVFCLIYRNLHAEAVRIVL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0568 428 SUPERFAMILY MFS general substrate transporter 17 372 IPR036259 -
Sto12g0568 428 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 182 IPR002259 GO:0005337|GO:0016021|GO:1901642
Sto12g0568 428 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 181 378 IPR002259 GO:0005337|GO:0016021|GO:1901642
Sto12g0568 428 PIRSF ENT 182 377 IPR002259 GO:0005337|GO:0016021|GO:1901642
Sto12g0568 428 PIRSF ENT 7 190 IPR002259 GO:0005337|GO:0016021|GO:1901642
Sto12g0568 428 Pfam Nucleoside transporter 227 373 IPR002259 GO:0005337|GO:0016021|GO:1901642
Sto12g0568 428 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 5 182 IPR030200 -
Sto12g0568 428 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 181 378 IPR030200 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0568 Sto-Chr12 3675245 3678046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0568 3 381 Organic Solute Cotransporters AT4G05120 60.145 1.58e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0568 K15014 - gmx:100798899 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0608 7 4483720 4485429 Sto12g0568 12 3675245 3678046 CCT
Sto12g0568 12 3675245 3678046 Sto12g0568 12 3675245 3678046 ECH