Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0532 ATGCAGCTTCTTCACAGCCCCACCAAAACCCATTCTTTCTTAGGCTTCATCTTGGTCTCCACTTCTTTTGGTGTCGTTTATCTTCTTGTTTCACTAGTAGTTCTTCGCACTTCCAAGCTTTTACATGTACATTCTTCCTCACAAGATGTGTCTGCGCAGACATCTCTTGATCATCTTGTGTTTGGAATTGCTTCAAGCAAGAATTCATGGCCTAAGCGTAAGGAGTATGCCAAGCTCTGGTGGAAACCCAATCAAATGAGAGGATGTGTGTTTGTGGATAGCCTCACAGCTAAAGACCAACCTTCCAACAATGACACTTCTCTTCCTCCTCTCTGCGTCTCTCAAAACACGTCACACTTCCGTTACACCTACCGGGGCGGCTACCGGTCCGCCATCCGGGTGGCGCGTGTTGTTGCAGAGACTGTTGCCTTGAATCATTCTGATGTGAGATGGTATGTGTTTGGGGATGATGACACTGTTTTCTTTCCAGAGAATTTGGTGAAGACCCTCTCCAAATATGATCATCAACTTTGGTACTATATTGGCACCCACTCGGAGAGTTATGAGCAGAGCCGATTTTTCGGGTTTGGAATGGCTTTTGGTGGAGCAGGTTTCGCCATAAGTTCCTCTCTAGCAAAAGTGTTGGCTAAGGTATTTGATTCATGCATAGAAAGGTATCCTCATCTGTATGGAAGTGATGGGAGGGTGTACTCTTGCTTGGCTGAGCTCGGAGTTGGATTAACCCACGAACCAGGCTTTCACCAGgtTGATTTACAAGGAAACATGTTCGGTCTATTGGCTGCGCACCCTGTAACGCCCTTGTTATCTCTCCATCACATGGATTACACAGACCCTATCTTTCCAAACATGACAAGACCACAAGCTATACGACATTTGTTTGATGCAGTTAATGTTGATTCCCAGAGGATCCTACAACAAACAATTTGTTATGACAGGTGGTTTTCATGGACAATCTCGGTGTCATGGGGCTATGCTGTTCAGGTATTCCCAAACCACATGTTCTTACCTGACGCTCTGAAAGTGCAACAAACATTCAAGCAATGGAAGAAGGGGAATGTTTTTGCATCAGCATATACTTTTAACAAACAAGACCTTCACCCTGACCCATGTAAGAGACCCACCATTTTTTATTTAGACACTGTGTCCTCTTCCAAGAATGGAATCATGAGCAATTATAGTAAATACTATCAGAACTGCACAAACGACCCTGCTTCACCCAGGAAACTGGAAGTGATCAAAGTGGTGACTCATAAGCTAGACCTCGACATCAAAAAGTTGCAGGCTCCAAGAAGGCATTGCTGTGACGTGTTGCCCTCTACAGCTCGTGACGTGATGGAAATTGCAATTAGAGAATGCAAAGAGGACGAATTGATTTATATGCACTGA 1407 0.4449 MQLLHSPTKTHSFLGFILVSTSFGVVYLLVSLVVLRTSKLLHVHSSSQDVSAQTSLDHLVFGIASSKNSWPKRKEYAKLWWKPNQMRGCVFVDSLTAKDQPSNNDTSLPPLCVSQNTSHFRYTYRGGYRSAIRVARVVAETVALNHSDVRWYVFGDDDTVFFPENLVKTLSKYDHQLWYYIGTHSESYEQSRFFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLQGNMFGLLAAHPVTPLLSLHHMDYTDPIFPNMTRPQAIRHLFDAVNVDSQRILQQTICYDRWFSWTISVSWGYAVQVFPNHMFLPDALKVQQTFKQWKKGNVFASAYTFNKQDLHPDPCKRPTIFYLDTVSSSKNGIMSNYSKYYQNCTNDPASPRKLEVIKVVTHKLDLDIKKLQAPRRHCCDVLPSTARDVMEIAIRECKEDELIYMH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0532 468 Gene3D - 46 306 - -
Sto12g0532 468 Pfam Protein of unknown function, DUF604 191 441 IPR006740 -
Sto12g0532 468 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 6 466 - -
Sto12g0532 468 PANTHER FRINGE-RELATED 6 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0532 Sto-Chr12 3454229 3455824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0532 17 433 Glycosyltransferase AT1G05280 55.164 2.87e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0532 - - gmx:100813816 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0653 7 4781249 4789176 Sto12g0532 12 3454229 3455824 CCT
Sto12g0532 12 3454229 3455824 Sto12g0532 12 3454229 3455824 ECH