Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0531 ATGCACAAGCGAAAGAAGAAAGAGACGACCTTGCCTCTATCCTCCAACCTCGCGAAGAGGCTTCCATTGCCCATAATGCCCTCTAACTTCCTCAGAACTGCAAACCTATTCACTCTCAACTTCAAATCCTTCCTTTTGATCCTCTCCCTTCTCCTCAACGTCTACCTCCTTCTCTACAGATGGCACTCCTTCGTCCCACCGTCCACCGCAATCTCTCTGGACACCGCCTCGCCGACCACGCGCCACCACATCGTGTTTGCAATCGCCTCCTCGTCCCTGTCTTGGCCCAAAAGGAAACACTATGTCCACCACTGGTACTCCCCCAATTCTACTCGCGCATTCGCTTTCCTCGACGCCCCCGTCGTTAATGCTTCCTCTTCGTTATCGGATGTTCCGCCGGTGGTTATTTCCGCTGACACATCCAAGTTTCCGTACACCTTCAAAAGAGGGCTTCCGTCTGCGATTCGTGTTGCGCGCGTGGTTAAGGAGGTGGTTGATCGGAACGAATCGGATGTTAGGTGGTTTGTATTTGGTGACGATGATACGGTGTTTTTTGTGGACAATTTGGTGGAAACTCTGTCGAAATACGATCATAATAGTTGGTTCTACATAGGGAGCAATTCAGAGAGCTACGAGCAGAACGTGAAGTATTCCTTTGATATGGCATTTGGTGGCGGAGGCTTCGCCATTAGCCATTCGCTCGCTAGGGTTTTAGCTAGGGTTTTGGACTCGTGTTTAAGGAGGTATGGGCATTTGTATGGAAGCGATGCGAGGATTTATTCTTGCGTGGCTGAGCTTGGTGTTGGGTTAACTCATGAACCTGGGTTCCATCAGGTAGACATGAGGGGGAATTTGTTTGGGATGTTGGCTGCACATCCATTATCTCCTTTGTTGTCTCTTCATCACTTGGATATATTGGAGCCTCTCTTTCCTGACATGAATAGAACACAAGCTTTGGAACACCTTTTTGCAGCTGCAAATGTTGATCCTGCTAGGATATTGCAGCAAACTGTGTGCTATGACCAATCAAATTCATTGACTTTCTCAGTTTCATGGGGTTTTGCTGTCCAGGTTTCTCAAGGCAACGAACTTCTCCCAAATCTTCTTTCAGTGCAGAGATCATTTACACCATGGAGCAGGGGTAGTAATGTTAATGCTCATTTTATGTATAACTTGAGAGATTATCCTAGAGATCCATGTAGAAGGCCTTCTGTCTTTTTCCTGGAAAGTGTAACAACTAATAAAAGGGGCATTTGGACAAATTACACAAGGCGTGTTGTTGGGCACTGTTTTGAGTCAAACCCTTTAAAGCAGCTGAAACATATCGGAGTATTTGCAAAGAAGCTAGAGCTTGACACTAAGCAGATGAAAGCTCTTCGTCGTCAATGCTGCAATGTCTTGCCATCTTCAAGTGACTCTATGATTATTCATATTAGACAATGTGGAACCGATGAACTAATTTCCATGCAATACTAG 1476 0.46 MHKRKKKETTLPLSSNLAKRLPLPIMPSNFLRTANLFTLNFKSFLLILSLLLNVYLLLYRWHSFVPPSTAISLDTASPTTRHHIVFAIASSSLSWPKRKHYVHHWYSPNSTRAFAFLDAPVVNASSSLSDVPPVVISADTSKFPYTFKRGLPSAIRVARVVKEVVDRNESDVRWFVFGDDDTVFFVDNLVETLSKYDHNSWFYIGSNSESYEQNVKYSFDMAFGGGGFAISHSLARVLARVLDSCLRRYGHLYGSDARIYSCVAELGVGLTHEPGFHQVDMRGNLFGMLAAHPLSPLLSLHHLDILEPLFPDMNRTQALEHLFAAANVDPARILQQTVCYDQSNSLTFSVSWGFAVQVSQGNELLPNLLSVQRSFTPWSRGSNVNAHFMYNLRDYPRDPCRRPSVFFLESVTTNKRGIWTNYTRRVVGHCFESNPLKQLKHIGVFAKKLELDTKQMKALRRQCCNVLPSSSDSMIIHIRQCGTDELISMQY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0531 491 Pfam Protein of unknown function, DUF604 213 464 IPR006740 -
Sto12g0531 491 PANTHER GLYCOSYLTRANSFERASE 35 489 - -
Sto12g0531 491 Gene3D - 72 327 - -
Sto12g0531 491 PANTHER FRINGE-RELATED 35 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0531 Sto-Chr12 3450047 3452437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0531 68 490 Glycosyltransferase AT4G15240 61.085 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0531 - - gmx:100813277 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0531 12 3450047 3452437 Sto7g0653 7 4781249 4789176 CCT
Sto12g0531 12 3450047 3452437 Sto12g0531 12 3450047 3452437 ECH