Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0518 ATGGAGGAAGAAGCGAGGTTGGAAGCAGAGGTGGCAGAGGTGGAAGCATGGTGGAAGTCAGAGAGGTTCAGGCTAACACGACGACCATACACAGCGAGAGAGGTTGTGTCACTGAGAGGGAACCTCAGGCAAAGCTATGGGTCCAACGAGATGGCCAAGAAGCTGTGGCGAACCCTCAAGACCCACCAAGCCAATGGCACCGCTTCCAGAACCTTCGGTGCACTCGACCCCGTTCAGGTCACCCAGATGGCTAACCACTTGGACACCATCTACGTCTCTGGCTGGCAATGCTCCTCCACTCACACCACCACCAACGAACCCGGCCCTGACCTCGCCGATTACCCTTACGACACCGTTCCCAACAAGGTTGAACATCTATTTTTCGCCCAACAATTCCATGACCGAAAGCAGAGAGAGGAGAGAATGAACATGAGCAGAGAAGAGCGAGCCAGAACCCCTTTTGTGGATTACTTGAGACCCATCATAGCCGATGGCGATACTGGCTTTGGTGGCACCACCGCAACTGTCAAGCTTTGCAAGCTCTTTGTGGAACGTGGTGCGGCTGGTGTCCACATCGAGGACCAATCCTCTGTCACCAAAAAATGTGGTCACATGGCTGGAAAAGTCCTCGTTGCCACTAGCGAACACATCAACCGCCTCGTCGCTGCCAGGCTCCAATTTGATGTCATGGCCGTAGAAACCGTTTTGGTGGCTCGAACTGACGCTGAAGCCGCCACTCTCATTCAGTCCAATATAGACACAAGAGACCATCAGTTCATACTGGGTGTCACCAACCCCACCTTGAAAGCTAAGAGCTTGGCCACTCTTATGGCTACCAATATGGCTAATGGCATGAATGGAGCTGAGCTTCAGGCCATTGAAGATCACTGGCTGTCCATGGCCAATCTCAAGACTTTTTCAGAGGCGGTTGTGGATGCCATTAAGAGCATGAACATAGGGGAAGATGATAAGAAGAGGAGGTTGAATGAGTGGATGCATTGTTCAAGTTATGACAAGTGtctctccattgaggaaggaaGAGAGATTGCTGAGAGGTTGGGAGTGGGGAATCTGTTCTGGGATTGGGACTTGCCTCGAACAAGAGAAGGGTTTTACAGATTCAAAGGCTCTGTGATTGCTGCAATTGTTCGTGGATGGGCTTTTGGCCCACATGCTGATGTGATATGGATGGAAACTAAAAGTCCCAATCTTGTTGAGTGTACTCAATTTGCTGAAGGGGTTAAGTCTAAGCACCCAGAGATTATGTTAGCATATAATCTGTCTCCATCGTTTAATTGGGATGCTTCGGGCATGAGTGATGAGCAAATGAAAGAGTTCATACCAAGAATTGCGAGGTTGGGGTATGTGTGGCAGTTCATAACAGTGGGTGGTGTACACTCTAATGCTTTGATTACTTCCACGTTTGCAAGGGATTTTGCCAACAGGGGAATGCTGGCTTATGTGGAGAAGATTCAGAGAGAGGAGAGGAATAATGGGGTTGACACACTTGCTCACCAGAAATGGGCAGGTGCTAATTACTACGATAAGTACCTCAAGACTGTGCAGGGAGGAGTGACTGAAGAGCAATTCAAAGAAACATGGACTAGGCCAGGAACTGTGGACATGGGTTCAGGGACTATGGTGGTAGCAAAGGCCAGAATGTAG 1665 0.4907 MEEEARLEAEVAEVEAWWKSERFRLTRRPYTAREVVSLRGNLRQSYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTQMANHLDTIYVSGWQCSSTHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQFHDRKQREERMNMSREERARTPFVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVATSEHINRLVAARLQFDVMAVETVLVARTDAEAATLIQSNIDTRDHQFILGVTNPTLKAKSLATLMATNMANGMNGAELQAIEDHWLSMANLKTFSEAVVDAIKSMNIGEDDKKRRLNEWMHCSSYDKCLSIEEGREIAERLGVGNLFWDWDLPRTREGFYRFKGSVIAAIVRGWAFGPHADVIWMETKSPNLVECTQFAEGVKSKHPEIMLAYNLSPSFNWDASGMSDEQMKEFIPRIARLGYVWQFITVGGVHSNALITSTFARDFANRGMLAYVEKIQREERNNGVDTLAHQKWAGANYYDKYLKTVQGGVTEEQFKETWTRPGTVDMGSGTMVVAKARM 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0518 554 Gene3D - 251 366 - -
Sto12g0518 554 PIRSF ICL 1 315 IPR006254 GO:0004451|GO:0019752
Sto12g0518 554 PIRSF ICL 358 533 IPR006254 GO:0004451|GO:0019752
Sto12g0518 554 Gene3D - 8 524 IPR040442 -
Sto12g0518 554 ProSitePatterns Isocitrate lyase signature. 200 205 IPR018523 GO:0003824
Sto12g0518 554 Pfam Isocitrate lyase family 10 527 IPR006254 GO:0004451|GO:0019752
Sto12g0518 554 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 2 524 IPR015813 GO:0003824
Sto12g0518 554 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 1 527 IPR006254 GO:0004451|GO:0019752
Sto12g0518 554 TIGRFAM isocit_lyase: isocitrate lyase 11 526 IPR006254 GO:0004451|GO:0019752
Sto12g0518 554 CDD ICL_PEPM 64 246 IPR039556 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0518 K01637 - gmx:100782793 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0518 12 3386763 3388619 Sto12g0518 12 3386763 3388619 ECH