Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0499 ATGACTTGGAAAAGCAGAGGAGACCTCTCATCTAGAAGCGTTGTTTCGCAAAAATGGGCGCTCTTCCTCTGTCTTGCAAGTTTCTGTGCTGGGATGCTCTTCACTAATAGTAGGATGTGGGCTATTCCTGAACCTAAAGGACTTGCAAGAACAACACCTATGGAGGCAGAAAAATTGAATCTAGTTTCAGAGGGTTGTAATTCAATAACTTTGCAAGAGAAGGAAGTGAAGCGAGAATCTCAAGACATCGTTAGGGAAGTTTTCAAGACGCATAATGCCATACAaaatttgGACAAGACGATATCAAACTTAGAGATGGAATTGTCTGCTGCAAGGGCTGCTCAGGAGTCTATACGTAGTGGTGCTCCTGTATCAGAAGATTTAGAGATGGTTCAACCATCTGGTAAGAGAAGGTACTTAATGGTTGTTGGAATTAATACTGCTTTTAGCAGCCGGAAAAGAAGAGACTCAGTTCGTGCAACCTGGATGCCACAAGgtgagaaaagaaagaaactgGAGGAAGAGAAGGGCATTATCGTTCGTTTTGTAATTGGTCACAGTGCTACGTCAGGGGGTATCCTAGACAGAGCAATTGAAGCAGAGGACCAAAAGCACGGAGACTTCCTGAAGCTGGATCATGTTGAGGGATACCTTGAATTGTCAGCAAAGACCAAGACATACTTTACTACTGCTGTCAACTTGTGGGATGCTGATTTCTATGTCAAAGTTGATGACGATGTTCATGTCAATATTGCGACACTAGGAGAAACTCTAGTTAGACACCGATCAAAACCTCGGATATACATTGGATGCATGAAATCTGGACCTGTCCTTTCTCAAAAAGGGGTAAGGTACCACGAACCTGAACATTGGAAATTTGGTGAGGCTGGAAACAGGTACTTTCGTCATGCCACAGGACAATTGTATGCCATTTCAAAGGACTTGGCTACATATATTTCAATTAACCAGCACGTTCTTCACAAGTATGCAAACGAGGATGTCTCACTCGGAGCTTGGTTTATTGGACTTGATGTGGAGCATATCGATGATAGGAGACTTTGCTGTGGCACACCACCAGATTGTGAATGGAAGGCTCAAGCAGGCAACGTCTGTGTTGCTTCATTTGATTGGAGCTGCAGTGGGATTTGTAGGTCTGCTGAAAGGATCAAAGAGGTCCATCGGCGGTGTGGAGAAGGCGAAAATGCATTATGGAGAGCCTCTTTCTAA 1227 0.4311 MTWKSRGDLSSRSVVSQKWALFLCLASFCAGMLFTNSRMWAIPEPKGLARTTPMEAEKLNLVSEGCNSITLQEKEVKRESQDIVREVFKTHNAIQNLDKTISNLEMELSAARAAQESIRSGAPVSEDLEMVQPSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIVRFVIGHSATSGGILDRAIEAEDQKHGDFLKLDHVEGYLELSAKTKTYFTTAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEHWKFGEAGNRYFRHATGQLYAISKDLATYISINQHVLHKYANEDVSLGAWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERIKEVHRRCGEGENALWRASF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0499 408 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 400 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto12g0499 408 Coils Coil 94 114 - -
Sto12g0499 408 Pfam Domain of unknown function (DUF4094) 16 113 IPR025298 -
Sto12g0499 408 Pfam Galactosyltransferase 153 350 IPR002659 GO:0006486|GO:0016020|GO:0016758
Sto12g0499 408 Gene3D - 136 353 - -
Sto12g0499 408 PANTHER HEXOSYLTRANSFERASE 7 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0499 Sto-Chr12 3279678 3283364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0499 1 408 Glycosyltransferase AT1G05170 79.412 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0499 K20855 - gmx:100793931 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0683 7 5012594 5016355 Sto12g0499 12 3279678 3283364 CCT
Sto12g0499 12 3279678 3283364 Sto12g0499 12 3279678 3283364 ECH