Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0496 ATGGGTGTGTCTAGGAGAttgtcttctctctttttcataGTATTGCTAGTGATATGCGCAAATGGGGAGGACCCTTACAGGTTCTACACTTGGAATGTCACTTACGGGGACATTTATCCGCTTGGAGTTAAACAACAGGGGATTTTGATTAATGGACAATTCCCAGGTCCACAGATCGATTCAGTGACCAACGATAATTTGATTATCAGTGTTTTCAACAGCTTGGATGAACCTTTCCTCCTCTCTTGGAATGGGGTGCAGCAAAGGAGGAACTCATGGCAAGATGGAGTGTATGGCACAAATTGTCCAATCCCACCAGGGAAGAACTTCACTTATGTCCTTCAAGTGAAAGATCAGATTGGTAGTTACTTTTACTTTCCTTCCCTTGCCTTCCACAAGGCTGCAGGAGGTTATGGTGGCTTCAAGATTGCTAGCCGCTCAGTCATCCCTGTACCTTTTCCTCCACCAGCTGGAGATTTCACCATTTTGGCAGGAGACTGGTACAATAGAAATCACACTGATTTGAAGGCCATTTTAGATGGTGGAAGTGACCTTCCATTCCCTGATGGGCTTGTCATCAATGGCCGTGGTTCTAATGGTTTCACATTCACAGTTGATCAAGGCAAGACTTACAGGTTCAGGATATCAAACGTGGGGCTGACAACTTCCATCAATTTCAGAATCCAAGGGCATAAGATGTTGCTGGTGGAGGTGGAAGGAACACACTCTCTCCAAAACACTTATGACTCCCTTGACATTCATCTTGGACAGAGTTATTCAGTGTTGGTAACTGCAGATCAACCACCACAAGACTATTACATTGTTGTCTCCACAAGATTTACCTCTCAAGTGCTATCTGCAACCTCCATTCTCCATTACAGTAACTCAGGCTCAAGTGTCTCTGGCCCTCCCCCTGGTGGCCCCACCATCCAAATTGATTGGTCTCTTGAACAAGCTCGATCTCTCAGGAGGAATCTGACAGCAAGTGGACCAAGACCTAATCCTCAAGGATCATACCACTATGGTATGATAAACACAACCCGTACTATTAGGCTTCAAAATTCTGCTCCAATTATCAATGGGAAGCAGAGATATGCTGTGAATAGTGTGTCCTTCATTCCTGCTGATACACCCCTCAAGCTTGCTGACTACTTCAAGATCTCAGGGGTTTTCTCCCTTGGAAGCATCTCAGACAGCCCCACTGGCTCTGGTGGCTACCTTCAAACTTCTGTCATGGCTGCGGATTTCCGTGGTTTCGCGGAGATTGTGTTTGAGAATCCCGAAGACACCCTGCAATCTTGGCACATTGATGGCCACAGCTTCTTTGTTGTAGGGTAA 1338 0.4529 MGVSRRLSSLFFIVLLVICANGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIDSVTNDNLIISVFNSLDEPFLLSWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGFKIASRSVIPVPFPPPAGDFTILAGDWYNRNHTDLKAILDGGSDLPFPDGLVINGRGSNGFTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTYDSLDIHLGQSYSVLVTADQPPQDYYIVVSTRFTSQVLSATSILHYSNSGSSVSGPPPGGPTIQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPIINGKQRYAVNSVSFIPADTPLKLADYFKISGVFSLGSISDSPTGSGGYLQTSVMAADFRGFAEIVFENPEDTLQSWHIDGHSFFVVG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0496 445 Pfam Multicopper oxidase 377 445 IPR011706 GO:0005507|GO:0016491
Sto12g0496 445 SUPERFAMILY Cupredoxins 343 445 IPR008972 -
Sto12g0496 445 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Sto12g0496 445 Pfam Multicopper oxidase 159 295 IPR001117 -
Sto12g0496 445 SUPERFAMILY Cupredoxins 153 333 IPR008972 -
Sto12g0496 445 Gene3D - 342 445 IPR008972 -
Sto12g0496 445 PANTHER L-ASCORBATE OXIDASE HOMOLOG 11 445 - -
Sto12g0496 445 SUPERFAMILY Cupredoxins 23 173 IPR008972 -
Sto12g0496 445 Gene3D - 26 147 IPR008972 -
Sto12g0496 445 CDD CuRO_1_AAO_like_1 28 144 IPR034273 GO:0005507
Sto12g0496 445 Gene3D - 158 332 IPR008972 -
Sto12g0496 445 PANTHER MULTI-COPPER OXIDASE 11 445 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0496 Sto-Chr12 3248652 3250528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0496 - - gmx:100791301 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0496 12 3248652 3250528 Sto12g0496 12 3248652 3250528 ECH