Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0476 ATGACGCTGCCCCGAGGTTTCGCCcttctcttcctcctccttgcTCTCTATTGTGGCTTAGACCCATTCCAGCATAGCCCCATTGCCGGCTTCCCGGACTTCCAAGTCCACAAAGTCGACGTGCCCGCTTGGTCTCAGGTTCCGACGGACGTTGACGCACACAACTTGTTGCAGAAATCcgagattaagttttcgaatcaaGTTATTGGGCCAGAGAGCATTGCCTTCGACCCTCTTGGTCGTGGCCCTTACACTGGTGTCGCTGATGGAAGAATCTTATTCTGGAATGGCCATTCTTGGACTGATTTTGCTTATACCTCCCCCAACAGTGAATGCATATGGAATTTTGGACACAGGTCAGAAATATGTAATCCTATAGCAAATGCTACACCATTAAGCTATGTGAAGAATGAGCACATATGTGGAAGGCCTCTGGGACTCAGATTTCACAAGAAAACAGGTGATTTATACATTGCAGATGCATATCTTGGGATCATGAAGGTGGGGCCTGAGGGTGGTTTGGCAACGTCTCTTGTAACTGAGGCTGAAGGAGTGCCACTTAGATTTACTAATGATGTAGACATTGATGAGGAAGGGAATGTTTATTTCACCGATAGCAGCACTAAATATCCAAGAAGGAACTTCATTCATTTGGTATTCTCCGGTGATGGCAGTGGCAGGGTTTTGAAATACAATCCTGTCACAGAGGAAACCGCTGTTCTTGCCAGGAACGTTGGATTCCCAAATGGCATTTCTTTGAGCAAAGATGGTTCCTTCCTTGTCTTCTGTGAAGGGTTAATTGGCAGGTTACGCAAGTTCTGGCTAAAAGGCGATAAAGCTGGGACTTCAGAGGTGTTAGCCATTCTTCCTGGATTTCCTGACAATGTGAGAGTGAATGAAAATGGAGACTTTTGGGTGGCTCTTCATTGTCGACGGTATATGTATAGTTACATTAATGGATGGAGGCTCCATGCTCTAGCTGTTAAGTATAGCCCTGAGGGTAAGCTTCTGCAGATATTGGAGGATAGTCAGGGAAAAGTTGTGAGAGCAATTAGTGAAGTGGAGGAGAAGGATGGTAAACTCTGGATGGGAAGTGTTCTCATGCCTTTTGTTGCAGTTTATGACTTAAAATAA 1134 0.4383 MTLPRGFALLFLLLALYCGLDPFQHSPIAGFPDFQVHKVDVPAWSQVPTDVDAHNLLQKSEIKFSNQVIGPESIAFDPLGRGPYTGVADGRILFWNGHSWTDFAYTSPNSECIWNFGHRSEICNPIANATPLSYVKNEHICGRPLGLRFHKKTGDLYIADAYLGIMKVGPEGGLATSLVTEAEGVPLRFTNDVDIDEEGNVYFTDSSTKYPRRNFIHLVFSGDGSGRVLKYNPVTEETAVLARNVGFPNGISLSKDGSFLVFCEGLIGRLRKFWLKGDKAGTSEVLAILPGFPDNVRVNENGDFWVALHCRRYMYSYINGWRLHALAVKYSPEGKLLQILEDSQGKVVRAISEVEEKDGKLWMGSVLMPFVAVYDLK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0476 377 Gene3D - 53 377 IPR011042 -
Sto12g0476 377 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 320 376 - -
Sto12g0476 377 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 8 320 - -
Sto12g0476 377 Pfam Strictosidine synthase-like, N-terminal 67 94 - -
Sto12g0476 377 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 320 - -
Sto12g0476 377 PANTHER STRICTOSIDINE SYNTHASE-RELATED 320 376 - -
Sto12g0476 377 SUPERFAMILY Calcium-dependent phosphotriesterase 47 376 - -
Sto12g0476 377 Pfam Strictosidine synthase 191 277 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0476 Sto-Chr12 3126152 3129051 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0476 - - gmx:100803331 617.076