Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0465 ATGGGAAAGAACCAGAAGACGGGACTAGGAAGGGCTTTGGTGAAGCAGCACAACCAGATGATCCAGCAAAGTAAGGAAAAGGGTCGGTTCTACAGGAATCAGGAGAAGAAGGTGCTGGAATCGGTCACGGAGGTTACTGACATTGATGCCATCATCGAACAAGCAGACGAGGCCGAGCGTCTTTTCGTCGCCGACCAACCCGCCCCAAGCCTCCCCATCAGCTTGGATCCAAGCTCTAGCACTGATAACTTGACAGCTGAAGAGAAGAGAGATCTTCAGAAGAGAGAAGAGGCGCTGAATGTTGGCAGTCTCCGAGTTCCACgcagGCCACCGTGGAGTGCAAACATGTCTGTGGAGGAGCTTGATGCCAATGAAAGACAAGCTTTCCTGACTTGGCGCCGCAGCCTAGCAAGACTCGAGGAAAATGAGAAGCTCGTCCTTACTCCCTTTGAGAAGAATCTTGATATCTGGAGACAGCTTTGGCGGGTTGTTGAGCGCAGCGATTTGCTTGTGATGGTTGTTGATTCGCGAGATCCATTGTTCTATCGCTGTCCTGATCTTGAGGCATATGCACGAGAGTATGATGAGCATAAGCGGACATTGCTCCTGGTTAACAAGGCGGATCTTTTGCCCACTTCAATCAGAGAGAAATGGGCAGAGTATTTCCAGGCTCATGACATTCTCTTCATCTTTTGGTCAGCTAAAGCTGCTTCTGCAGCTCTGGAAGGTAAAAAGCTTTTGGCTTATGATAACATGGGCAGGACCAATAACCCAGACACAAAAATATATGGAAGAGATGAGCTTCTAGCTCGATTACAGTCAGAGGCAGAAGAAATAGTAGAGAGGAGGAAAAAATCAAGCTCCTCTGACATAGGGCCTTCTAACATTCAACCTCATGATGAAAATACTGCTGATAGTTCGTCATCAAGTAATGTAGTTGTGGGATTTGTTGGTTATCCTAATGTGGGGAAAAGTTCTACTATCAATGCTTTGGTAGGTCAAAAACGGACAGGTGTGACCTCCACTCCAGGGAAGACGAAGCACTTCCAAACATTGATTATTAATGATAGACTAACTCTTTGTGACTGTCCTGGACTAGTTTTTCCATCGTTCTCAAGCTCAAGGTATGAGATGATTGCCTGTGGGGTGTTGCCAATTGATAGGATTACTGAACACAGGGAGGCTGTCCAGGTTGTAGCTGATAGAGTACCAAGACACGTCATTGAGGAGGTTTATAAGATCAATCTTCCTAAACCTAAGCCATATGATCCTCAATCTCGCCCCCCTCTAGCATCTGAACTTCTGAGAACATATTGTGCTTCTCGTGGGTATGTGGCCTCTAGCGGGCTACCTGATGAAACTAGAGCTGCCCGTCAGATACTTAAGGATTACATTGATGGGAAGCTGCCTCACTATGAGATGCCCCCTGGAATGTTGAATGAGGAACCAGCTCTGGCAGATCGGACAGGAGTTGACTCAGGTAACTTGAACGAGTCAGATTCTTCCGATATTGAAAATTCTTCAGATGTTGAGAGTGAAGTTGCACCTAATCTTGAGCACGTACTGGATGATCTCAATTCATTTGACATTGCTAATGGGCTTGCTCCTAAGAAAGTTACTATCAAGAAGTCTAATGCATCTCACAAGCACCACAAAAAGCCTCAGAGGAAAAAAGATCGATCCTGGAGAGTAGGGAATGATGATGCGGATGGGATGCCAGTTGCAAGGGTCTTTCAGAAACCAGTAAATACAGGTCCAATGAAAGCCTGA 1770 0.461 MGKNQKTGLGRALVKQHNQMIQQSKEKGRFYRNQEKKVLESVTEVTDIDAIIEQADEAERLFVADQPAPSLPISLDPSSSTDNLTAEEKRDLQKREEALNVGSLRVPRRPPWSANMSVEELDANERQAFLTWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREYDEHKRTLLLVNKADLLPTSIREKWAEYFQAHDILFIFWSAKAASAALEGKKLLAYDNMGRTNNPDTKIYGRDELLARLQSEAEEIVERRKKSSSSDIGPSNIQPHDENTADSSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIINDRLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRITEHREAVQVVADRVPRHVIEEVYKINLPKPKPYDPQSRPPLASELLRTYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYEMPPGMLNEEPALADRTGVDSGNLNESDSSDIENSSDVESEVAPNLEHVLDDLNSFDIANGLAPKKVTIKKSNASHKHHKKPQRKKDRSWRVGNDDADGMPVARVFQKPVNTGPMKA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0465 589 PANTHER GTPASE LSG1-1 1 557 - -
Sto12g0465 589 MobiDBLite consensus disorder prediction 281 309 - -
Sto12g0465 589 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 557 IPR043358 GO:0003924
Sto12g0465 589 Gene3D - 156 370 IPR027417 -
Sto12g0465 589 CDD HSR1_MMR1 156 369 - -
Sto12g0465 589 MobiDBLite consensus disorder prediction 539 573 - -
Sto12g0465 589 Gene3D - 372 475 IPR023179 -
Sto12g0465 589 MobiDBLite consensus disorder prediction 476 508 - -
Sto12g0465 589 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 369 IPR030378 GO:0005525
Sto12g0465 589 MobiDBLite consensus disorder prediction 289 309 - -
Sto12g0465 589 MobiDBLite consensus disorder prediction 542 559 - -
Sto12g0465 589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 444 IPR027417 -
Sto12g0465 589 MobiDBLite consensus disorder prediction 492 508 - -
Sto12g0465 589 PRINTS GTP1/OBG GTP-binding protein family signature 314 334 IPR006073 GO:0005525
Sto12g0465 589 PRINTS GTP1/OBG GTP-binding protein family signature 360 375 IPR006073 GO:0005525
Sto12g0465 589 Pfam 50S ribosome-binding GTPase 314 374 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0465 Sto-Chr12 3036468 3040339 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0465 K14539 - gmx:100817523 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0465 12 3036468 3040339 Sto12g0465 12 3036468 3040339 ECH