Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0436 ATGATTATGGCGCCAAGAAAAGCTCGCGAGCGTGAAATGCTCGTGGAGTCCATGTACTCAGTCATTGCACTTCTCTTCGTCCTCGTTACTTGCGTTGAGCTCTGTGACGGCGCCACCGTGGTAGACGTCTACCGATTGATTCAGTACGATATGGCAGGGGTTCCATTCGGATCTCGACTCGCTAGCCTCAATCATCATGCTGCCTCTCTCCACTTCTCTCCTCATGCTGATCTCTCACGCACTGTGCTCATGATACCGCTTCGCGAATTGAACATGAGTTTTGTTAaagAATATATTGTTGAAAGAAAGCCACTGGGGGGTTTGTTATTTTTGCTGCCTCAGATGTTCAATTTAGAAAATAAAGGTGGCATGAGAATTAATCATCAAGATGATGGTAAGGAGCCGCTGAAGGATGTCTTGGCTGAACTTGAACAGACTCTCATACACTCCAACGTACCTACTTGCACCTTGTTACAGTACCCTGTTTATTTTGCTTTTGAGAATGACAACATTCATGCTGTGTTAACTGATATCAAGAAGAATGATGCCACTGGTCAACCTGCAACTGCTACTACTGGAGGATACAAGTTTGTTGTTTCAGCCCCAGAACCAAAGAAAGTTGTATCTCCCACCATTACAAACATACAGGGATGGTTGGCAGGACAGAAGACTGATGATGATGCTAGTCAATTACCTACCATTGCTATAGTGGCATCATATGACACCTTTGGGGCCGCTCCTGCATTATCAGTGGGAAGTGATAGTAGTGGAAGTGGAGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTCTCTCTTCTCTATTCTAATCCAAAGACAAGAGGACATTACAATCTACTCTTTGGGCTAACTTCTGGTGGGCCATACAACTATAATGGAACTCGCAAGTGGCTTCGCAGCTTTGATCAACGTCTGCGTGAAAGCATTGACTATGCAATCTGCTTAAATGGTATTGGCTCATGGGAAAATGATTTGTGGATTCATGTATCTAAGCCTCCAGAAAATGCCTATATAAAGCAAATTTTTGAAGATTTTTCTAGCGTGGCAGAAGAGTTGGGCTTTAAAGTTAATCTGAAgcacaagaaaataaatatttcaaatcCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTTACTGCTGCTACTCTCTCTGAACACTCTACTGCACCTGAATTGCTAGAAAGGACTGGCGGTCTAGTTGATAGCAGGCATTTTGTCAATGAAGCAGCTGTTGTCAGAAGTGTGAAGTTAATTGCTGAGAGTCTTGCGAGGCATATTTACAGACATCAAGGAAAGAACATCCAAGTCTTTGCTGACAACAGTAGTTTGGAAGTAAATCCTTCTTATATTCAATCATGGCTAGATGTATTGTCACAAACACCTCGGGTGGCTCCATTTATGCTAAAAGACGATCCTTTTGTCATGGCACTAAAAAAGGAATTAGAAGACCACACTGATGAAGTTAATCTGCAACGAGATGTTCTGGACGGGATGTTCACTTTCTATGATTCAACTAGGGCAATGCTAAATGTATATCAGGTTGCCAGTGTCACATTCGACCTTCTGTTGCTTCTAGTATTGGGATCATATTTAATTGTGCTCTTCAGTTTCCTGGTCATCACAACTAGGGGCCTTGATGATCTAATCAGTCTATTTCGACGGCCTCCCTCTCGAAAAGTGAAGACTGCATAG 1722 0.4239 MIMAPRKAREREMLVESMYSVIALLFVLVTCVELCDGATVVDVYRLIQYDMAGVPFGSRLASLNHHAASLHFSPHADLSRTVLMIPLRELNMSFVKEYIVERKPLGGLLFLLPQMFNLENKGGMRINHQDDGKEPLKDVLAELEQTLIHSNVPTCTLLQYPVYFAFENDNIHAVLTDIKKNDATGQPATATTGGYKFVVSAPEPKKVVSPTITNIQGWLAGQKTDDDASQLPTIAIVASYDTFGAAPALSVGSDSSGSGVVALLEVARLFSLLYSNPKTRGHYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICLNGIGSWENDLWIHVSKPPENAYIKQIFEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSEHSTAPELLERTGGLVDSRHFVNEAAVVRSVKLIAESLARHIYRHQGKNIQVFADNSSLEVNPSYIQSWLDVLSQTPRVAPFMLKDDPFVMALKKELEDHTDEVNLQRDVLDGMFTFYDSTRAMLNVYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0436 573 PANTHER NICALIN 7 572 - -
Sto12g0436 573 PANTHER NICALIN 7 572 IPR016574 GO:0009966|GO:0016020
Sto12g0436 573 Coils Coil 484 504 - -
Sto12g0436 573 CDD M28_nicalin_like 140 437 - -
Sto12g0436 573 Gene3D Zn peptidases 128 436 - -
Sto12g0436 573 Pfam Nicastrin 234 372 - -
Sto12g0436 573 SUPERFAMILY Zn-dependent exopeptidases 199 434 - -
Sto12g0436 573 PIRSF Nicalin 3 568 IPR016574 GO:0009966|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0436 7 571 EF-hand Containing Proteins AT3G44330 72.212 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0436 - - gmx:100778865 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0436 12 2781441 2787836 Sto12g0436 12 2781441 2787836 ECH