Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0434 ATGACTCGCATTTTGGTTCAGCGGGGTTCTTCCAGCAGTTCTTCTTCAAACCAAAGCCGATCTTCTTCCTTGCCTGGGTCTTCATCATCCCGGGCAGAGCCTCAGGTTACAGTTCCTTTGGTTCCTTCAGCTGTGAAAGACGAGAACAGTGGAGAGGAGGTACAAAACCTAGTTGTTGGTAATGAGCTTTTGGAGTATTCTGAGAATAGTGACTCTAAAGCAAAAAACGATGACCTCGTGATTGAAAGTCTTCATCATGAGCAGAATGACACCTCAACTGTTGAAATGGCTGATATTGAGAAAGCTGTTAAGGAGGAGGTTGGCGGAACAAGAGAATTGCAGAAAGGACTGTGTGGAGTGAGAATTTCAGAAAGACTTGCATTAGAAAATGAGGGCTCCAATGGGAATTCTTCACGTACAGCTAGTGATACTTCACATCCACCACCTCCTCCTCTTCCACCTCCAAAACCTTCAGCAGCTAACTTAAATTTAAGGAGAAACGTGTCATCAAATTCAAATGCTGTCCACATAGGATCATCTAGAAGATCATCTGCATGGTCTGCTGTTTCAGCTAGGACTTCACCTGCTGGGTCTCGGCCTTCTTCTCCTAGGTCACACTGTGAAAATGAGGGCTACAATAGTGCTGACGAACAGAATCCGTGCTTTGTATCTTCATATGATGATTTAGGAAGAGAACAgcaatttgaaattgatatcAGAAGGGCAAAAGGTTTCgaagttaaaaaaatgatgGAGGATGGGAATTGTCTTTTTCGGGCAGTTGCAGACCAGGTGTATGGGGACTCTGAATCGAGCGGGAAAGAGATCACTTTTGTCAATTTATTACAGAAGGATTCACATCTTATTgtaagaggaagagaagagataaGGCTATTAGCACAGTTTAGGATGGCAAAATTTTCTGACTTTCCTAGTAGAGACAGTCGTAGAGATATGCAGAGACAATTTGCTCTTGGTGTGGCTAGAGATGTCTGGAAAATGCTGGGTCTTGCTGGATATGGCCAGAATAAAGCTGCTCTTGCTGAATATGGCTGGATGACACTGCATGTCTATGGAAACAATGTTGAGATCCAATCCATGTGTGAGATGTATAATCGGCCCATTCATATATACTACTACACTACAGAACCCATCAACATCTTTCATGGAAGCTATAACACTGACACACCGCCAATACGGCTGAGTTATCATCATGGGAATCATTACAACTCCCTTGTTGACCCTCGTCGCTTGACAATTGGTGCAGGACTTGGGTTCAGCTGCCTTCGTGGGACAAATGTTGACAAAGATCAAGTCAAGGCTGCGATGAAAGCCCAACAAGACCAACAGATTGATAATGCAAAGGGACGGTTTTACTCTGATCTTGAGCTTACAGAAAAGGAGATTGCACATATGGTGATGGAAGAATCTCGGGCTGAATATCTTGCAGATCGTACGTTTAAGCAACAACTTGGCCATAGAGAGTCCTCGACGTCAAATGCCGAGCCATCATCTTCTGGAGCTAGATCATCTGGTGCTGATGGAAAGATGGAGATTAAGAAAGAGCAAGATTGTAATCTTAGCAATAGTATGCAGATGGTGCTATCAATGGGATTTAGCTACCTGCAGGCGATTGAGGCTTACAGCATATTTGGCGATGATGTGGATTCTATGGTTTGTTATCTCTTGGAAACTGGCAGTAGCAGCAGGCGCAAAGGCAAGGCCACCGAATGA 1734 0.4279 MTRILVQRGSSSSSSSNQSRSSSLPGSSSSRAEPQVTVPLVPSAVKDENSGEEVQNLVVGNELLEYSENSDSKAKNDDLVIESLHHEQNDTSTVEMADIEKAVKEEVGGTRELQKGLCGVRISERLALENEGSNGNSSRTASDTSHPPPPPLPPPKPSAANLNLRRNVSSNSNAVHIGSSRRSSAWSAVSARTSPAGSRPSSPRSHCENEGYNSADEQNPCFVSSYDDLGREQQFEIDIRRAKGFEVKKMMEDGNCLFRAVADQVYGDSESSGKEITFVNLLQKDSHLIVRGREEIRLLAQFRMAKFSDFPSRDSRRDMQRQFALGVARDVWKMLGLAGYGQNKAALAEYGWMTLHVYGNNVEIQSMCEMYNRPIHIYYYTTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFSCLRGTNVDKDQVKAAMKAQQDQQIDNAKGRFYSDLELTEKEIAHMVMEESRAEYLADRTFKQQLGHRESSTSNAEPSSSGARSSGADGKMEIKKEQDCNLSNSMQMVLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0434 577 Gene3D - 352 425 - -
Sto12g0434 577 MobiDBLite consensus disorder prediction 490 516 - -
Sto12g0434 577 Pfam OTU-like cysteine protease 253 409 IPR003323 -
Sto12g0434 577 MobiDBLite consensus disorder prediction 162 214 - -
Sto12g0434 577 ProSiteProfiles OTU domain profile. 245 415 IPR003323 -
Sto12g0434 577 MobiDBLite consensus disorder prediction 130 214 - -
Sto12g0434 577 MobiDBLite consensus disorder prediction 144 158 - -
Sto12g0434 577 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 520 565 IPR015940 -
Sto12g0434 577 PANTHER OTU DOMAIN CONTAINING PROTEIN 356 524 - -
Sto12g0434 577 PANTHER OTU DOMAIN CONTAINING PROTEIN 32 271 - -
Sto12g0434 577 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 32 271 - -
Sto12g0434 577 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 356 524 - -
Sto12g0434 577 MobiDBLite consensus disorder prediction 1 36 - -
Sto12g0434 577 SUPERFAMILY Cysteine proteinases 355 415 IPR038765 -
Sto12g0434 577 SUPERFAMILY Cysteine proteinases 232 278 IPR038765 -
Sto12g0434 577 MobiDBLite consensus disorder prediction 492 511 - -
Sto12g0434 577 MobiDBLite consensus disorder prediction 1 54 - -
Sto12g0434 577 Gene3D - 228 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0434 Sto-Chr12 2768657 2773931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0434 K12655 - jre:109005170 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0434 12 2768657 2773931 Sto12g0434 12 2768657 2773931 ECH