Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0422 ATGGCAGTGAGGGCAACAGTCTCGCGCTTCCCAATTGACCCTGATGCCCAGGAGGGCTCGGGTTTGCCCTGGGGAGTGACTGTCACGCCCTTCGCGGCCAAGGACGAGAACGGTCAAGCTCCGGCTTATGGATCTGATGGCCACCTCTTGCCCCGCTGCGAGAACTGCTGGGCCTACTTCAACACTTACTGCGAGCTCGAACAGTGGTCATGGTCTTGCTCCCTCTGTGGGACCCTCAATGGCCTTTCCTCCAAGGCTATTACTCGATACTCTCATCCACAGTCTTGTGCCGAGATGATGTCCTCCTTTGTAGATCTTGAATTGCCTGAGGAATCACCAGAGGAACCAGAAATGCAAGCCCGTCCAGTCTATGTTGCTGCTGTTGACTTGTCCTGTAAGATTTTATTGGTTCAacaagtatGTTCATCTGCAGCTTCAGAGGAGTTTCTAGAACTCATTAAAAGTGCATTGCTGGCAGCTTTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCATAAATTAGGGTTGTATGATGTCCAAGGTCCAATACCCGTTGTAAAAAATGTTTCCATCCCTCCTGATACAGAGGGAACCTTACCAATTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTTTGGCTCCTGTGGAAACTTGTAAGGAACGCATTGCATCTGCTCTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACAGCAGCAGGTCAAGGACTGGACGGTGTTCTGATTGGTGGGCGTGGTTTTGGGGTGGCAATGGAAGCCCTTTTCAATTACCTTGGATCTGAATATGGAAACACCTTTGCTTTAGCTAGAGTTTTTGCTTTCTTGTCTGGTCCTCCTGATTATGGAGCTGGACAATTGGATACAAGACGATATGGTGAGCAATATGCCAGCAAAGGAGAGGATGCGGATCGTGCTTTACTCCCTGAGCAGACACCATTCTATAAAGATCTGGCTGCTGTTGCTGTTCAATCAGGTGTCTGTGTGGACATATTTGCTGTAACAAATGAGTACACTGATTTGGCATCCCTGAAATTCCTGAGTATTGAAAGTGGGggttctttattattatataccaGTACTGAGGATTCAACTTTGCCTCAGGACATGTACCGAATGCTGAGTCGGCCATACGCTTTCAGCTGTGTACTTAGATTGAGAACATCGACTGAATTTAAACCTGGCCATTCTTATGGTCATTTTTTCCCAGATCCACAGTATGAAAATGTTCAGCACATCATTTGTTGCGACTCTTATGCCACTTATGCTTATGATTTTGAGTTTGACAACAATGTTGGATTTTCAAGGCATGCATCAGAAGTTCCAACGCTTCAGATTGCTTTTCAGTACACAGTAGTAGTTCCTCCTGAGGAGCTTTCCAGCCCAGGCGTGGTTTCTACTAGTAGAGCCAAGCATTCCCTTAAACGTCGATTGAGGATTCGAACCCTGCAGTTTAATACTGCTCAGAACATACACGAACTTTATGATAGCGTTGATCCTGAAGTTGTGCTATCTTTGCTTGTTCACAAGGTCATATTAGCTTCTTTGAAGGAAGGAGTTCGAGAGGGCAGGATGTTACTTCAAGATTGGCTTGTGCTCCTCACAGCCCAGTATAATGATGCTTATAAACTTATTCAGTACAGGAGTGGAAGTTCCATAAGTTCTCAGATTGATGTTTCATTCTCCCAATGTCCTCAACTGCAGCCCCTACCCCGCTTAATTTTTGCTCTCCTTCGTAATCCTCTCCTTCGTTTTCATGAAGAAGGAGTTCACCCTGACTATCGCATCTATCTACAATGCCTTTTCAGTGCTCTAGAACCAAGTTCTCTCCACCGTGCTGTGTATCCAGTGTTGACATCATATGCTACACCAGATAAACAAGCATATCCACGCCATTCCTTGAGTCGTGCTGCGCTAATTACCAGTGGCAGTCCAATATTTTTCCTTGACGCCTTCACAACTCTCGTTGTGTTTTATTCTTCAACTGCAGACCCATCACTTCCTTTCCCTCCACCCCATGATTGTTTGTTAAGGACTACTATCAACAAATTGAAGCAAGAGAGATGCATTACACCCAAGCTCATATTTATACGAGGAGGGCAGGATGATGCCTCCGTTTTTGAGAACTTTCTGATTGAGGAACAGGATGTTGATGGAAGCGGTCTCACAAGTGTCATGGGTTTTGTTTCCTTTCTTGAAGGTATTACGCATGATGTGTTGGAATACATGAAATAG 2274 0.4499 MAVRATVSRFPIDPDAQEGSGLPWGVTVTPFAAKDENGQAPAYGSDGHLLPRCENCWAYFNTYCELEQWSWSCSLCGTLNGLSSKAITRYSHPQSCAEMMSSFVDLELPEESPEEPEMQARPVYVAAVDLSCKILLVQQVCSSAASEEFLELIKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVSIPPDTEGTLPIELEDVMPLLQFLAPVETCKERIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVAMEALFNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQSGVCVDIFAVTNEYTDLASLKFLSIESGGSLLLYTSTEDSTLPQDMYRMLSRPYAFSCVLRLRTSTEFKPGHSYGHFFPDPQYENVQHIICCDSYATYAYDFEFDNNVGFSRHASEVPTLQIAFQYTVVVPPEELSSPGVVSTSRAKHSLKRRLRIRTLQFNTAQNIHELYDSVDPEVVLSLLVHKVILASLKEGVREGRMLLQDWLVLLTAQYNDAYKLIQYRSGSSISSQIDVSFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALITSGSPIFFLDAFTTLVVFYSSTADPSLPFPPPHDCLLRTTINKLKQERCITPKLIFIRGGQDDASVFENFLIEEQDVDGSGLTSVMGFVSFLEGITHDVLEYMK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0422 757 Gene3D Sec23/Sec24 helical domain 484 641 - -
Sto12g0422 757 Gene3D von Willebrand factor, type A domain 121 391 IPR036465 -
Sto12g0422 757 SUPERFAMILY beta-sandwich domain of Sec23/24 3 511 - -
Sto12g0422 757 Pfam Sec23/Sec24 helical domain 512 624 IPR006900 GO:0006886|GO:0006888|GO:0030127
Sto12g0422 757 PANTHER OS05G0443300 PROTEIN 1 755 - -
Sto12g0422 757 Pfam Sec23/Sec24 trunk domain 139 386 IPR006896 GO:0006886|GO:0006888|GO:0030127
Sto12g0422 757 PANTHER SEC24-RELATED PROTEIN 1 755 - -
Sto12g0422 757 SUPERFAMILY Zn-finger domain of Sec23/24 46 112 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Sto12g0422 757 Gene3D - 30 103 - -
Sto12g0422 757 SUPERFAMILY Helical domain of Sec23/24 512 628 IPR036175 GO:0006886|GO:0006888|GO:0030127
Sto12g0422 757 SUPERFAMILY vWA-like 122 389 IPR036465 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0422 - - jre:109020880 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0422 12 2700485 2707628 Sto12g0422 12 2700485 2707628 ECH