Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0419 ATGGCCAAAATCAGATCAGTAATACCaccctcttccttcttcttcacactcTTTTTCCTGCTTCTCACTATTCCTGATTCATGTCTTCAGCAAATCCAAGCCTTAGAGTTCGGAATAAACTACGGGCAAATAGCGAACAACCTACCATCTCCATCTCGCGTGGCTTCTCTGATAAAATCCCTCAACGTGACGAGAATCAAACTCTACGACGCAGACCCAAACGTTCTACAAGCCTTCTCAAACTCCAATGTAGAATTCGTGATAGGCCTAGGAAACGAGAATCTTCAAAACATGAGAGACCCATCAAAAGCCCAATCATGGATCCAACAAAACGTCCAACCATACCTCTCCGCCACCCAAATCACCTGCATCACCGTAGGCAACGAGGTTTTCGGCAGCAACGACACAAACTCTGTCCAGAACCTTCTTCCCGCAATGCAATCCGTGTACAATGCCCTCCTTACCCTCGGACTCCAACAACAAGTCACTGTCACAACTGCCCATTCCTTCAACATCTTAGCCATCTCTTACCCTCCTTCCTCAGGGGCATTCCGGGAAGACTTAATCCCCTACATCCAACCCCTCTTGAACTTCCATGCTCAAGTCAAATCCCCATTCTTGATCAACGCTTATCCTTTCTTTGCCTACAAGGGCAGTCCAAACGACGTGTCGTTGAACTATGTGTTGTTTCAGCCAAATTCGGGGATGGTGGATCCTAACACTAATCTTCACTATGATAATATGTTGTATGCTCAGATTGATGCTGTGTATGCGGCCATAAAAAGGTTGGGTCATACGGACATTGAGGTTAGGATTTCTGAGACGGGGTGGCCTTCCAAGGGTGATCCTGATGAGATTGGAGCTTCACCCGAGAATGCCATGCTCTACAATGGGAATTTGCTAAAGAGGATAGAGATGAAACAGGGGACTCCTGCTAAGCCTTCCGTTCCTATTCATATTTATGTGTTCGCTCTTTTCAATGAGGATTTGAAACCTGGTCCTACTTCTGAGAGGAACTATGGGCTTTATTATCCTGATGGGACTCCTGTTTATAATGTTGGCTTACAAGGCTATTTACCGGAGATGGTTGTTCAGTATTCTGCGTCTCAATGTAATCATGTTGTGTGTGGGGGTTTTCTTGTCTATGTCTTAGCAATAGCATGCTTGGTTTCTGCTTGGGAGCTTTCAAGGTCGTGA 1197 0.4461 MAKIRSVIPPSSFFFTLFFLLLTIPDSCLQQIQALEFGINYGQIANNLPSPSRVASLIKSLNVTRIKLYDADPNVLQAFSNSNVEFVIGLGNENLQNMRDPSKAQSWIQQNVQPYLSATQITCITVGNEVFGSNDTNSVQNLLPAMQSVYNALLTLGLQQQVTVTTAHSFNILAISYPPSSGAFREDLIPYIQPLLNFHAQVKSPFLINAYPFFAYKGSPNDVSLNYVLFQPNSGMVDPNTNLHYDNMLYAQIDAVYAAIKRLGHTDIEVRISETGWPSKGDPDEIGASPENAMLYNGNLLKRIEMKQGTPAKPSVPIHIYVFALFNEDLKPGPTSERNYGLYYPDGTPVYNVGLQGYLPEMVVQYSASQCNHVVCGGFLVYVLAIACLVSAWELSRS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0419 398 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 374 IPR044965 GO:0004553|GO:0005975
Sto12g0419 398 Pfam Glycosyl hydrolases family 17 38 353 IPR000490 GO:0004553|GO:0005975
Sto12g0419 398 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 15 374 - -
Sto12g0419 398 SUPERFAMILY (Trans)glycosidases 37 353 IPR017853 -
Sto12g0419 398 Gene3D Glycosidases 36 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0419 Sto-Chr12 2681808 2683260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0419 87 390 Glycoside Hydrolase AT2G27500 68.197 3.26e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0419 - - gmx:100786020 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0419 12 2681808 2683260 Sto12g0419 12 2681808 2683260 ECH