Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0418 ATGGCCGCATACAAGGTCAAGTTGATTGGTCCAGATGGTAAAGAGAACGAGTTTGAGGCCCCTGATGATACCTACATCCTGGATGCAGCAGAGAATGCTGGAATGGAGCTCCCTTACTCGTGCCGGGTTTCTGGTTCAGTGGATCAGTCTGATGGCTCATTCCTTGATGACAATCAAATGAAGGACGGTTATCTTCTAACCTGTGTCTCCTATCCAACTTCAGATCTAGTGATTCATACACACAAAGAAAATGATCTCTATTGA 264 0.4508 MAAYKVKLIGPDGKENEFEAPDDTYILDAAENAGMELPYSCRVSGSVDQSDGSFLDDNQMKDGYLLTCVSYPTSDLVIHTHKENDLY 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0418 87 CDD fer2 6 79 IPR001041 GO:0051536
Sto12g0418 87 SUPERFAMILY 2Fe-2S ferredoxin-like 3 84 IPR036010 GO:0051536
Sto12g0418 87 Gene3D - 1 87 IPR012675 -
Sto12g0418 87 PANTHER FERREDOXIN 1 87 - -
Sto12g0418 87 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 4 84 IPR001041 GO:0051536
Sto12g0418 87 PANTHER FERREDOXIN-3, CHLOROPLASTIC 1 87 - -
Sto12g0418 87 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 2 87 IPR010241 GO:0009055|GO:0022900|GO:0051537
Sto12g0418 87 Pfam 2Fe-2S iron-sulfur cluster binding domain 11 73 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0418 Sto-Chr12 2674417 2674713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0418 K02639 - fve:101309216 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0418 12 2674417 2674713 Sto12g0418 12 2674417 2674713 ECH