Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0388 ATGATACTGCTAACGCCTTCTTCCCTCTCCATTCTCCATAGAAATTCTAGCTTCTTCCCTTCTCGTACCAGGCCAAACCCTAGCGGTTCTTTCACTGTTCGATGCTCTTCCAGTGTGCAGCAGATTGAGAAGTCCTCTACCTCCTCTGAGGGCAGAGACTTGAGTTCGGAGCTCTACGCTTCGGTTCCGTTCCCTCCAATCAAGGTTGCCAAGAGAGTGGTGTTGGTGAGGCACGGCCAGAGCACCTGGAATGCCGAAGGCAGGATCCAAGGCAGCTCCAATTTCTCGGTTCTTACTAAGAAGGGCGAGGCTCAAGCTGAGACTTCGCGTCAAATGCTCATGGATGATAAGTTCGATGTTTGTTTTGCCAGTCCTTTGGCACGATCAAAGAAAACGGCTGAAATTATCTGGGGACCTCGTGAGCAGTCGATAATTCCAGAATATGAATTGAGGGAAATCGATTTATATTCATTTCAAGGCCTCTTAAAGCATGAGGGGAAAGAAAAATATGGCCCAGTTTATCGCCAATGGCAAGTAGATGCTGCAAATTTCAACATTGATGGGCATTATCCAGTGAGAGAGTTATGGGAGCGTGCTAGGGGCTGCTGGACTAAAATCTTAGCTCACGATAGCAGGTCTATTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCAACCGCAATTGGTTTAGGAACTGAGTATTTCAGAACTTTACTTCAGAGCAACTGTGGTGTGAGTGTGCTTGATTTCATCCCAAGATCTGAGGGTGGCTCTCCACATATTTGCCTTAACCGCTTGAATCAGACCCCCGGCTCACCTGTTGCTGGTGGGAAATCAGGAGGCAGAAAAACAAATAAGCAGATCATACTTGTTTGTCATGGAAATACACAGGGCAATACAGAGGATGGTTTTCCATTGGCCGGCAATCAGCAGTTGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTAGATTTGAAAGTGAATTCTATAATCAGCAGTCCTAACGAAGCTAGTATTGGGACAGCCAATGCAATCTCCCAAGTACAAGAAGCTGCTGATTGCTTGGGTGCTGACTGCGTGCCACGCTATGTTGAGATGAAGCAGATGGGGAACCTGGATGTTGAAACAATCTTTCAGCAATCCAAGGCAAGAACTAACTGTTTAGATGTGGAGTGGTATTTTATGATTGAGGATGGGCTGAAAACAACATTATGGAACCAATCTGCAAAGGCCTGGCAATCTCTGTTAGATGAACTAGCCGATGAATCCGACGTAGTAGTTGTAGTTGGTCGACAATTTGCTGATGCTGTACACCTGTTTTTAATGTGGAGATTTGCTAACTATCTCATCTTACATATGTTTGTGTTTGAGTTGGGAAACGGGAACGTTGCCTTGCCTGCTATTCTGATAGGTCCTaaaagaagggcAGGAGCCAGATTGTGCACTCTGTCGGCGGCATTATCCATCCCAATCCAACTTCTAAACATAGTTTCTTAA 1521 0.4523 MILLTPSSLSILHRNSSFFPSRTRPNPSGSFTVRCSSSVQQIEKSSTSSEGRDLSSELYASVPFPPIKVAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGEAQAETSRQMLMDDKFDVCFASPLARSKKTAEIIWGPREQSIIPEYELREIDLYSFQGLLKHEGKEKYGPVYRQWQVDAANFNIDGHYPVRELWERARGCWTKILAHDSRSILVVAHNAVNQALVATAIGLGTEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPVAGGKSGGRKTNKQIILVCHGNTQGNTEDGFPLAGNQQLNMLGVIQSQKSAELLLDLKVNSIISSPNEASIGTANAISQVQEAADCLGADCVPRYVEMKQMGNLDVETIFQQSKARTNCLDVEWYFMIEDGLKTTLWNQSAKAWQSLLDELADESDVVVVVGRQFADAVHLFLMWRFANYLILHMFVFELGNGNVALPAILIGPKRRAGARLCTLSAALSIPIQLLNIVS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0388 506 SMART PGAM_5 72 226 IPR013078 -
Sto12g0388 506 CDD HP_PGM_like 72 253 IPR013078 -
Sto12g0388 506 Pfam Histidine phosphatase superfamily (branch 1) 73 254 IPR013078 -
Sto12g0388 506 Pfam Histidine phosphatase superfamily (branch 1) 291 358 IPR013078 -
Sto12g0388 506 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 75 84 IPR001345 GO:0003824
Sto12g0388 506 Gene3D - 282 471 IPR029033 -
Sto12g0388 506 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 286 359 - -
Sto12g0388 506 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 36 256 - -
Sto12g0388 506 SUPERFAMILY Phosphoglycerate mutase-like 71 267 IPR029033 -
Sto12g0388 506 Gene3D - 71 273 IPR029033 -
Sto12g0388 506 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 286 359 - -
Sto12g0388 506 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 36 256 - -
Sto12g0388 506 SUPERFAMILY Phosphoglycerate mutase-like 289 442 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0388 Sto-Chr12 2468756 2477003 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0388 K22200 - gmx:100798495 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0388 12 2468756 2477003 Sto12g0388 12 2468756 2477003 ECH