Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0380 ATGGTTGAAGAAGCCGAACCCAGATTCTTCGTACCCAACCCAATCCAGGCCGGTGTCGGTTTCGACGTGGCCGAGCAGATTAAGCTCATATGGGACGTCATCAAAACGCCATTGATAGTGCCTCTCTTGAATCTCGCGGTCTACATTTGCTTAGCCATGTCTCTAATGCTCTTCTTCGAGAGGCTCTACATGGGTGTCGTCATCATCCTCGTCAAGCTCTTCTGGAAAAAACCTGAGCAGCGTTACAAATACGAGCCCATCCAAGACGACGCCGAATTGGGCTCCTCCAATTTCCCAGTCGTTCTTGTCCAAATCCCAATGTTCAATGAACGAGAGGTCTACAAGGTCTCCATTGGAGCAGCTTGTGGTCTTTCATGGCCTTCGGACCGTCTTGTGATCCAAGTCCTCGATGATTCCACTGACCCTACCATCAAGCAAATGGTGGAGCATGAGTGCCAGAGATGGGCAAACAAAGGCATAAACATAACGTATCAAATCAGAGAGAACAGAACGGGATACAAAGCTGGTGCACTGAAAGAAGGGCTTAAGCGAAGCTATGTGAAACACTGCGAGTACGTGGCCATCTTCGACGCCGATTTCCGGCCGGAGCCGGACTTTCTCCGGCGAGCCATTCCTTTCTTGGAAGGAAATCCCGATCTCGCTCTGGTTCAAGCTCGCTGGAGATTCGTGAATGCGGACGAATGTTTGTTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTTACAGTGGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTTGGTTTCAACGGGACAGCAGGTGTTTGGAGAATTGCCGCTATCAATGAAGCAGGAGGCTGGAAAGACAGAACCACAGTGGAGGACATGGATCTTGCTGTTCGTGCTAGTCTCAGGGGCTGGAAGTTTCTCTATCTTGGAGACCTCcaggccAAAAGTGAACTTCCAAGTACCTTGCGAGCCTTCCGATTCCAGCAGCATCGATGGTCTTGTGGTCCTGCTAATCTCTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTCAGGTTTTGGAAGAAAGTGTATGTGATATACAGCTTCTTCTTCGTGCGTAAAATCATAGCCCACATGGTGACCTTCTTCTTCTACTGTGTGGTGCTTCCCCTCACAATTTTGGTCCCTGAGGTTCAGGTTCCCATATGGGGAGCTGTTTACATTCCTTCCATCGTCACCATCCTCAACTCTGTGGGAACTCCAAGATCCATTCACCTTCTGTTTTACTGGATCCTCTTTGAGAATGTCATGTCTTTGCATCGAACTAAGGCAACCTTCATTGGTCTTCTAGAAGCTGGGAGAGCCAACGAGTGGGTTGTCACTGAAAAACTTGGAGACTCTGTCAACAAGAACAAAGCAGATGCTGCTAAGAACAAGACCAACGTTATCAAACCAACCAAAAAACCTCGCCTCAAAATTAGCGAAAGGTTTCATTTACTAGAGCTGGGGTTTGCAGCTTTCCTCTTCGTTTGTGGATGCTATGATTTTGTGCACGGGAAGAACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTCTCAATTGTCGGATTTGGCTATGTCGGCACcattgtttga 1626 0.4723 MVEEAEPRFFVPNPIQAGVGFDVAEQIKLIWDVIKTPLIVPLLNLAVYICLAMSLMLFFERLYMGVVIILVKLFWKKPEQRYKYEPIQDDAELGSSNFPVVLVQIPMFNEREVYKVSIGAACGLSWPSDRLVIQVLDDSTDPTIKQMVEHECQRWANKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLEGNPDLALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVQVPIWGAVYIPSIVTILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNKNKADAAKNKTNVIKPTKKPRLKISERFHLLELGFAAFLFVCGCYDFVHGKNNYFVYLFLQTITFSIVGFGYVGTIV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0380 541 PANTHER BNAC09G36340D PROTEIN 6 541 - -
Sto12g0380 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 380 IPR029044 -
Sto12g0380 541 PANTHER - 6 541 - -
Sto12g0380 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 318 IPR029044 -
Sto12g0380 541 CDD CESA_CaSu_A2 99 335 - -
Sto12g0380 541 Pfam Glycosyl transferase family group 2 192 390 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0380 Sto-Chr12 2407105 2410633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0380 2 541 Miscellaneous Gene Families AT5G22740 81.331 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0380 K13680 - gmx:100802752 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0380 12 2407105 2410633 Sto12g0380 12 2407105 2410633 ECH
Sto12g0380 12 2407105 2410633 Sto7g0825 7 6224445 6229302 ECH