Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0373 atGGGGTATTCAAGTTTGTTCTTGATTTGCTTTCTTCTAGTTGTAGTGCTTAGTGTGAGTAATGGGCAGCCTCTAGTCCCTGCATTGTTCATATTTGGGGACTCTGTAGTTGATGCAGGGAATAATAACCACTTATACACCATTGTTAAAGCAAATTTTCCTCCCTATGGAAGGGACTTCAAGAATCACAACCCTACTGGAAGGTTCTGCAATGGAAAGCTTGCCTCAGATTTCACtgCTGAAAACCTTGGATTCACCTCTTACCCACCAGCTTACCTCAACTTAAAGGCCAAAGGGAAGAGCCTCTTGAATGGTGCCAATTTTGCTTCGGCTGCTTCTGGTTACTATGAATCTACAGCCAAATTATATCATGCAATTCCTTTGAGTCAGCAGGTGTTGAACTACAAAGAATGCCAGAATATATTGGTGGACGTAGCAGGACAATCAAATACTTCATCAATTATATCTGGTGCTATATATCTTGTTAGTGCTGGGAACAGTGACTTCATTCAGAACTATTACATTAATCCTTTGCTTTACAAGGTTTATACAGCTGATCAATTCTCAGACATTCTCTTGCAATCCTATTCCAATTTTATTAAGAATTTGTATGCACTTGGAGCAAGGAAGATTGGTGTGACTACATTACCTCCAATGGGTTGCTTACCAGCAGCTATTACTCTATTCGGCTCTCACAGCAACGAATGCGTGGACAGGCTAAACAATGATGCTATTAACTTCAATAAAAAGCTAAACACCACATCACAGAGTTTGCAGAAAACACTTccaaacctcaaattggtcctcctTGATATCTACCAGCCTCTGCATGACCTAGTCACCAAGCCTTCTGAAAatgGGTTTTTTGAAGCAAGAAAGGCTTGTTGTGGCACGGGGTTGCTAGAGACGTCTATATTATGCAACCACCAGTCCATAGGGACGTGTGCTAATGCATCAGACTACGTATTCTGGGATGGTTTTCATCCTTCAGAGGCTGCAAACAAAGTCTTGGCGGATGATTTGCTCATCGCTggcctctctctcttctcataA 1053 0.3951 MGYSSLFLICFLLVVVLSVSNGQPLVPALFIFGDSVVDAGNNNHLYTIVKANFPPYGRDFKNHNPTGRFCNGKLASDFTAENLGFTSYPPAYLNLKAKGKSLLNGANFASAASGYYESTAKLYHAIPLSQQVLNYKECQNILVDVAGQSNTSSIISGAIYLVSAGNSDFIQNYYINPLLYKVYTADQFSDILLQSYSNFIKNLYALGARKIGVTTLPPMGCLPAAITLFGSHSNECVDRLNNDAINFNKKLNTTSQSLQKTLPNLKLVLLDIYQPLHDLVTKPSENGFFEARKACCGTGLLETSILCNHQSIGTCANASDYVFWDGFHPSEAANKVLADDLLIAGLSLFS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0373 350 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Sto12g0373 350 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 IPR008265 GO:0006629|GO:0016298
Sto12g0373 350 Gene3D SGNH hydrolase 19 344 IPR036514 -
Sto12g0373 350 SUPERFAMILY SGNH hydrolase 29 340 - -
Sto12g0373 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Sto12g0373 350 PANTHER GDSL-MOTIF LIPASE 9 349 - -
Sto12g0373 350 PANTHER GDSL ESTERASE/LIPASE EXL3 9 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0373 Sto-Chr12 2345191 2346601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0373 18 341 Acyl Lipid Metabolism Gene Families AT4G10950 33.028 3.37e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0373 - - gmx:100804640 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0843 7 6394069 6397703 Sto12g0373 12 2345191 2346601 CCT
Sto12g0373 12 2345191 2346601 Sto12g0373 12 2345191 2346601 ECH