Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0365 ATGCTATTGGAGCACACAGTTGGCAATCTTGATCCCCTCTATATAGTAAATAAGGTTCCCTATGGGCTGGAAATACCCCGACTCAGGGATCGGCTGGTCAAAGTTATCACTGATTACAGGACTGAAACATCACTTAGAAATGGGTGCAATGATATCCTTAAGGCCGACTGTGTCAACCTTTTAGTAAAGTACTACAAGGAGGCGAGGCATGGAATTTATTTGAGTAATGAAGATGAGCCACGATCTAAAAGGAGCAATACTCTTTCTAATCAGGTGGTTGAGAAATCTCCAAATCTGAAAACCATGGAAGTTAAATCGAAGACGAGGGGAGGTGCAAGATGTTGTATATGTTTTGACCCCTTTTCTATACAGAATGTGTCAGTCATTGCTTTCTTTTGCTGTCATGCCTATCATACAACTTGTCTGATGGATTCCTCCTACACTAGTAGTAGCAATAGAGAGATTGAAGTCACTTCTGGAGAGGCAGAAACATACCACGTTTACAATGGTTATGTGGATGATGATAGCGATGATGAAGAAACCAACACGGGTGGCTCTCGTATGCGTTGTATACTGTGTACTACTGCTGCTAGTTAA 597 0.4171 MLLEHTVGNLDPLYIVNKVPYGLEIPRLRDRLVKVITDYRTETSLRNGCNDILKADCVNLLVKYYKEARHGIYLSNEDEPRSKRSNTLSNQVVEKSPNLKTMEVKSKTRGGARCCICFDPFSIQNVSVIAFFCCHAYHTTCLMDSSYTSSSNREIEVTSGEAETYHVYNGYVDDDSDDEETNTGGSRMRCILCTTAAS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0365 198 PANTHER VACUOLAR PROTEIN SORTING VPS41 2 197 IPR045111 GO:0006623
Sto12g0365 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 197 IPR013083 -
Sto12g0365 198 SUPERFAMILY RING/U-box 113 151 - -
Sto12g0365 198 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG 2 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0365 Sto-Chr12 2299193 2300140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0365 K20184 - gmx:100804340 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0365 12 2299193 2300140 Sto12g0365 12 2299193 2300140 ECH