Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0363 ATGCAGCCGAATTTGTTTCCTTTTGGAAGCGTTCTGGGAAATCCGTTCATAGCCAATGGTGATTTGAGTGAGGGGTTTGACAGCTCTAGGGTTTTTTTCTTAGTTCCTTTCTTGCTCTTCCAGGGAGGAGGAATGGATTTGTCCAAGGTCGGGGAAAAGATCTTGAGTTCTGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCTTCTGTTTCTGATCGGCCTGAGGTTCCAGCTCGAGCTGCTGCAGCTGCAGCTGTCGCACGTGCTCTTGCAGGATTGCCACCTCATCAGCGGTATAGTCTCTCATCAAGTTCTGAAGAACTGAGTTCTATATATGGAAGCAGATCTCATGGTCAAGTAGTGGATGAGCTGGAGGATGAATTCTATGAGGAGGAGTTTGATCCAGTTAAACATGTTTTAGAGCATGTCCCTGCTGAAGAAAATGAGCTGTCACATTTTGAGAAGCAGGCCGCCCTTAGATTGGCACAACTGGATAGAGTTGCAGAGTGCTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTTAGGGAACTGGAGAAAGACTTGAGAATTGCCAATGTCATTTGCATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCAAGGGATCTCATTGTGAATTCTTATTCCAAGAAGAAACAAGCTCTTCTGGATGTGCTTCCAGTGTTGACAGAGCTTCAACGTGCATTGGACATGCAATCAACACTTGAATCCCTTGTTGAGGAAGGGAATTACTGCAAGGCATTTCAAGTTCTATCAGAATTTTTGCAAATCCTAGATAGTTTGTCAGAACTTTCAGCAATACAAGAGATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAGCTGGATGCTCTTTTGTTGGGAGTATGTCAAGAATTTAAGGAAGATGGCTATATAACCGTAATTGATGCCTACGCATTGATCGGAGACATCACTGGTCTGGCCGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATCTCAGAAACTCACTCTGTGTTAAAGGCTATTATATATGAGGATGAGGAAGCACCTTTGCAAAATAGTagGCTCACTTATAGCGACTTATGCCTTCAAATATCTGAATCTAAGTTTAGGCAGTGCTTATTAAGAACACTAGCGGTTCTCTTTGAGCTTATGCATTCATACCATGAAATTATGGAGTTTCAGCTAGATAGACAGGACTCTGCAGGCCAAACTTCAAATGAATGCAATGATGGCATTTCCTGTAGTCCAGCCAAGGCTCTGGAAGCTGATGCAGATATTAGAACCTGCAGCAATTCTTTGTCCAGTGGTGGAGATGAAATTCATGGTTCATCTTCAAGGGAAGAATCTGCAACAGCCAGCTCACAAGTTGATACTTCCAACCCTACTTGTTTACCATGTATAGATTCTCATGATCCATTTAATGAGGCCACAAAGGAGGACAATACCGCGTCAAGCATCGAATCCCCTTGGTATCACCTGCGCAAAGAAGCTACAGAATTTGTTTCACAAACTCTTCAACGAGGGCGAAAGAATCTTTGGCATCTCACAACAAGCCGTATTTCAGTACTGCTTTCTTCTGATTCAGCTTGTACCACAAGCATTCACCAATTTTTGAAGAATTATGAAGATCTCAGCGCCTTTATATTGGCTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAGTTCAGGCAGAAGTTGAAGGTGGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAACATTCACGCACTTAAAATGGTTTTGGAGAGAGAGACTTGGTTAAAATTACCTCCTGATACAGTGCAGATGATCAGTTTTGCTGGACTAGTTGGTGATGGAGCACCTTTGATTTCTTCATCTAACCACAAATCAATTGATGCCAGAGCAGTTCACTCTGATAAATCAGTGAACTTGGTTCAGAGTCACACCAGTGCTAGGAAAAGTGGGTTCTCTCATTGGCTTAGAAGTGGAAACCCATTTTTGCAGAAGTTTTCAACCTCTAAAGAAGGCCATTGTTTCCCCCAATCTAATGGATCGACCTATGGTGAATTTGATGAAAGTCCAAGAAACAATTTGAATGGTGATAAAGTCTTGCCTGGAAAGAATGATTCCGATCAAATGAATGGTACTAATTCTGTTTCAGACGATGAAAATGAGGATCTTCATGCAGATTTTATTGATGAAGACAGTCAATTGCCAAGTCGAAGTTCAAAACCCAATCATCCaagaaaaaaatctttaaattgTAATGAGGAAGAAAATACAGCACAGACGGGATCTTCTTTATCTCTTTTAAGATCGATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATATGCCAATTATTTgagatttttttctattttgtatATGAAACATTTGGTCAGCAAAACACTGGTTTAAGTGGAAAAGGATCAACTGATTCTCTCAATTCAGATCGGCTAAGGACAGCCTTATCCAAAATAACACAAGATTGTGAGCAGTGGATAAAgcttccatcatcttcttccacTTCTCTAAGTTCATCATTTGTACATTCAGATGTGACACCAGCTAGCCCACCCAACACAAATTTGGGTAACCCATTGACATCTTTGAGTCTCAAGGAAAGATGTGTGGCCGTCGACACTATATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTTCAATCAATGCTTTTGCAAAGTAATGCAACTGTGCTTGAGGATTTCTATCAGCATCTGGTGGATGCTGTACCAGATCTTACAGAGCATATTCATAGGACAACGGCAAGACTACTGCTGCACATTAATGGGTATGTTGAACGCGTTGCCAATTCTAAATGGGAAGTAAGAGAGCTTGGGCTAGAGCATAATGGGTATGTTGATTTGTTGCTGGGGGAATTTAAGCACTACAAAACACGGCTTGCTCATGGAGGAATTCGTAAAGAGATTCAAGACTTGCTATTAGACTACGGGCTCGAAATTGTGGCGGAAACTCTCGTAGAAGGACTTTCACGAGTGAAGAGATGTAGTGATGAAGGACGAGCCTTGATGTCATTGGATCTGCAGGTTTTGATCAATGGGCTGCATCATTTTGTGTCCGTGAATGTGAAGCCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTACCTTCCAGAAACAGAATTTGTGCACTGGGCACGCGCACACCCGGAATACTCCAAAAGTCAGATTATCGGGCTGATAAACCTTGTTGCTTCGATGAAAGGTTGGAAGAGGAAAACCAGGTTGGAAGTGTTGGAAAAGATTGAATGA 3375 0.4095 MQPNLFPFGSVLGNPFIANGDLSEGFDSSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRSHGQVVDELEDEFYEEEFDPVKHVLEHVPAEENELSHFEKQAALRLAQLDRVAECLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDVLPVLTELQRALDMQSTLESLVEEGNYCKAFQVLSEFLQILDSLSELSAIQEMSRGVEVWLGKTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDITGLAEKIQSFFMQEVISETHSVLKAIIYEDEEAPLQNSRLTYSDLCLQISESKFRQCLLRTLAVLFELMHSYHEIMEFQLDRQDSAGQTSNECNDGISCSPAKALEADADIRTCSNSLSSGGDEIHGSSSREESATASSQVDTSNPTCLPCIDSHDPFNEATKEDNTASSIESPWYHLRKEATEFVSQTLQRGRKNLWHLTTSRISVLLSSDSACTTSIHQFLKNYEDLSAFILAGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNIHALKMVLERETWLKLPPDTVQMISFAGLVGDGAPLISSSNHKSIDARAVHSDKSVNLVQSHTSARKSGFSHWLRSGNPFLQKFSTSKEGHCFPQSNGSTYGEFDESPRNNLNGDKVLPGKNDSDQMNGTNSVSDDENEDLHADFIDEDSQLPSRSSKPNHPRKKSLNCNEEENTAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYFVYETFGQQNTGLSGKGSTDSLNSDRLRTALSKITQDCEQWIKLPSSSSTSLSSSFVHSDVTPASPPNTNLGNPLTSLSLKERCVAVDTISLVARILNRSKAHLQSMLLQSNATVLEDFYQHLVDAVPDLTEHIHRTTARLLLHINGYVERVANSKWEVRELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEIQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSVNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYSKSQIIGLINLVASMKGWKRKTRLEVLEKIE 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0363 1124 Pfam Vacuolar-sorting protein 54, of GARP complex 121 410 IPR019515 -
Sto12g0363 1124 PANTHER UNCHARACTERIZED 15 1124 IPR040047 GO:0032456|GO:0042147|GO:1990745
Sto12g0363 1124 Pfam Protein of unknown function C-terminus (DUF2451) 895 1124 IPR019514 -
Sto12g0363 1124 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 15 1124 - -
Sto12g0363 1124 MobiDBLite consensus disorder prediction 450 479 - -
Sto12g0363 1124 MobiDBLite consensus disorder prediction 685 705 - -
Sto12g0363 1124 MobiDBLite consensus disorder prediction 733 749 - -
Sto12g0363 1124 MobiDBLite consensus disorder prediction 685 779 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0363 K23288 - gmx:100803274 1782.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0363 12 2272666 2288412 Sto12g0363 12 2272666 2288412 ECH