Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0362 ATGGAAAACTTGTGTGTCCTTCTCTTCCCTTTTCTGCTCCTTGCTCTTCTTCTACATGGACCAGGAAGCGTCACTGCTTTAAGAAACCGTGATGGTTCAGAGGAATGGGGATATGTTCAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTACACAAGTCCCCACAGAGTGGAACATCCCTCCAAGCCATGGCCAATCATTCTTTGGTTGCAAGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGGAACTTTCAAGAGATTGGGCCTTTAGACACCAATTTGAAGCCAAGAAATTCCACATGGCTTCAAAAAGCGGATCTCTTATTTGTGGACAATCCAGTGGGAACAGGATATAGTTTTGTGGAGAATAATGATTCGAAGTTGCTAGCAAAAACAGATGAGGAGGCGGCCATTGATTTGACGACATTGTTGATTCATATATTCAATAGAAATCAGAAGCTGCAAAAGAGTCCTCTGTTCATAGTGGCAGAGTCTTATGGAGGCAAATATGCTGTCACTCTTGCATTATCTGCTCTCAAAGCTATTGAAGATGGCAAATTGAAGCTCAATCTTGGAGGTGTGGCATTAGGGGACAGTTGGATCTCCCCAGAAGATTTTGTGTTCTCATGGGGTCCTCTTCTTAAAGACGTCTCCAGGCTTGACGACAACGGGCTGCAAAAATCAAACAATTTGGCTCAGAAGATCAGGAAGCAAATTGGGAATGGCCAATTCGTGGAAGCAACTAGATCATGGAGTAAACTTGAGTCTGTCATTAGCTCTAGCAGCAACAATGTAGACTTTTACAATTTTCTGCAGGATGCTGGAAGTGACTCTGCAACTACATCAGCAATGGAGGGAGTGGGGTTACACAGAGAAATAGCACTGACACGATACTCCAACTATCTAACTTCAATGAGGTCATCatctggtggtggtggtggtgatctTAAAACCTTATTAAATGGTGTCATAAAGAGAAAGTTAAAGATCATCCCTGAAAATGTTACATGGAGAGAGCAGTCCAGAGAAGTTTTTAGACATCTTCAAGCTGATTTTATGAAACCAAGAATCAATGAGGTTGATAAGCTGCTAGCTAAAGGGGTTAATGTGACTGTGTACAACGGACAAGTTGATCTGATTTGTGCGACAAAGGGAGCTGAAGCTTGGGTTAAGAAACTCAAGTGGAAAGGGCTTCAAAGTTTCATGAGGAAGGACAGAACAGCTATGTACTGTGAAAATGACAGAAAGACGAAAGGATTTGTAAAGTCATACAAAAACCTACACTTCTATTGGATTCTTGGAGCTGGTCATTTTGTACCCACTGATGAGCCTTGCGTAGCATTAAAAATGGTGGGTCAAATTACACAGTCACCAGCTCCTTCTTAA 1389 0.4183 MENLCVLLFPFLLLALLLHGPGSVTALRNRDGSEEWGYVQVRPKAHMFWWLYTSPHRVEHPSKPWPIILWLQGGPGASGVGIGNFQEIGPLDTNLKPRNSTWLQKADLLFVDNPVGTGYSFVENNDSKLLAKTDEEAAIDLTTLLIHIFNRNQKLQKSPLFIVAESYGGKYAVTLALSALKAIEDGKLKLNLGGVALGDSWISPEDFVFSWGPLLKDVSRLDDNGLQKSNNLAQKIRKQIGNGQFVEATRSWSKLESVISSSSNNVDFYNFLQDAGSDSATTSAMEGVGLHREIALTRYSNYLTSMRSSSGGGGGDLKTLLNGVIKRKLKIIPENVTWREQSREVFRHLQADFMKPRINEVDKLLAKGVNVTVYNGQVDLICATKGAEAWVKKLKWKGLQSFMRKDRTAMYCENDRKTKGFVKSYKNLHFYWILGAGHFVPTDEPCVALKMVGQITQSPAPS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0362 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 98 110 IPR001563 GO:0004185|GO:0006508
Sto12g0362 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Sto12g0362 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 173 IPR001563 GO:0004185|GO:0006508
Sto12g0362 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Sto12g0362 462 PANTHER CARBOXYPEPTIDASE 10 460 - -
Sto12g0362 462 ProSitePatterns Serine carboxypeptidases, serine active site. 162 169 IPR018202 GO:0004185
Sto12g0362 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 460 IPR001563 GO:0004185|GO:0006508
Sto12g0362 462 SUPERFAMILY alpha/beta-Hydrolases 31 458 IPR029058 -
Sto12g0362 462 Pfam Serine carboxypeptidase 31 455 IPR001563 GO:0004185|GO:0006508
Sto12g0362 462 Gene3D alpha/beta hydrolase 23 460 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0362 Sto-Chr12 2268344 2271607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0362 K09646 - gmx:100808412 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0362 12 2268344 2271607 Sto12g0362 12 2268344 2271607 ECH