Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0361 ATGGCTCCAAAGCGTGGTAAGAAGATCGTGGTGAAATCCACCAGAAAAGTGGTGCAGGAAACAATTCAAGTATCCGTAGTCAGCAGCAGCAAAAGACCAAGCAGAGACACCCAGAAAGATGAGGAAGGGAACAGTAGTATAAGCCAAGAGGACGTGATCAGAACCATTCCCGTTGAAGAGGTGAAAGCTCAAGCTCAAGCTCCCGTGGAAAATGATGAAAAGcaggaaaaaaagaaagggatgaaaaggaagaggaagagaggcGGAGGAGAAGGGTACAGGAGGTACGTGTACAAAGTATTGAAGCAGGTGCATCCAGAGATGGGGATTTCGTTTCAGGCCATGACGATTCTCAACAATCTGATGAGTGATATGTTTGAGAGGCTTGCGGATGAGGCTACGAAGCTGAAAAAGTACACAGGGCATATGACATTGTCGTCCAGGGAGATTCAAGGGGCTGTCAAGCTGGTTCTTCCCGGAGAGCTTGGGAGGCATGCCATTGCAGAGGGTGCTAAAGCTGTCAGTAATTACATGTCAAACCATGCTCCTTCTTAA 555 0.4414 MAPKRGKKIVVKSTRKVVQETIQVSVVSSSKRPSRDTQKDEEGNSSISQEDVIRTIPVEEVKAQAQAPVENDEKQEKKKGMKRKRKRGGGEGYRRYVYKVLKQVHPEMGISFQAMTILNNLMSDMFERLADEATKLKKYTGHMTLSSREIQGAVKLVLPGELGRHAIAEGAKAVSNYMSNHAPS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0361 184 Gene3D Histone, subunit A 55 181 IPR009072 GO:0046982
Sto12g0361 184 MobiDBLite consensus disorder prediction 33 47 - -
Sto12g0361 184 Pfam Core histone H2A/H2B/H3/H4 32 156 IPR007125 GO:0003677
Sto12g0361 184 SMART h2b3 83 179 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 PANTHER HISTONE H2B 39 180 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 MobiDBLite consensus disorder prediction 25 89 - -
Sto12g0361 184 PRINTS Histone H2B signature 93 111 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 PRINTS Histone H2B signature 112 132 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 PRINTS Histone H2B signature 134 151 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 PRINTS Histone H2B signature 151 164 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 PRINTS Histone H2B signature 164 177 IPR000558 GO:0000786|GO:0003677|GO:0030527
Sto12g0361 184 SUPERFAMILY Histone-fold 71 179 IPR009072 GO:0046982
Sto12g0361 184 PANTHER HISTONE H2B.2 39 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0361 Sto-Chr12 2261505 2262059 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0361 K11252 - dcr:108208264 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0361 12 2261505 2262059 Sto12g0361 12 2261505 2262059 ECH