Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0327 ATGAGCAATTCATACCCTGAAGATCACGAAGAAGCGACTGTTGCTGGATTTGAAGTTCCAAAGTCACCAGATTCCAGTTACAACAACGTGTACCCTGGAAACGAAGATGAGGCTCGTGATCCACCTACAGTCCCTCCGCATTTGCAGCAGACCCTGCTCCGCTATCCTGCAAGTAGAAGCATTTCAGAGACTGTGCCACCACCTCATAACGTGATCCTCAATCATCTTTATATTGAAAACAGAGAAGCTCCAAGATCTGTGGTGGCGTTAGGATTCACTCATCGCTTCCGATCCAAATATGTTACTGTTGTGCTTTACAAACCAGTCCAAAGAGGGAGTAGTACAAGCATTTAA 354 0.4548 MSNSYPEDHEEATVAGFEVPKSPDSSYNNVYPGNEDEARDPPTVPPHLQQTLLRYPASRSISETVPPPHNVILNHLYIENREAPRSVVALGFTHRFRSKYVTVVLYKPVQRGSSTSI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0327 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 38 108 IPR006828 GO:0005515
Sto12g0327 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 112 IPR043554 -
Sto12g0327 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3 1 112 IPR030067 GO:0009744|GO:0043562
Sto12g0327 117 Gene3D - 13 109 - -
Sto12g0327 117 SUPERFAMILY AMPKBI-like 12 109 IPR037256 -
Sto12g0327 117 MobiDBLite consensus disorder prediction 1 49 - -
Sto12g0327 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0327 Sto-Chr12 2048398 2048835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0327 - - rcu:8271870 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0327 12 2048398 2048835 Sto12g0327 12 2048398 2048835 ECH